cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i Sig_18_tissue.md.bam --algo HsMetricAlgo --targets_list targets/xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed Sig_18_tissue_xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:160000001, elapsed 0.0s, est remaining 0.9s, peak mem 114MB, user 0.1s, sys 0.9s, output queue size 69
progress 10% @chr2:69000001, elapsed 0.1s, est remaining 0.8s, peak mem 114MB, user 0.2s, sys 2.2s, output queue size 21
progress 15% @chr3:17000001, elapsed 0.1s, est remaining 0.7s, peak mem 114MB, user 0.3s, sys 3.4s, output queue size 79
progress 20% @chr3:150000001, elapsed 0.2s, est remaining 0.7s, peak mem 114MB, user 0.4s, sys 4.6s, output queue size 29
progress 25% @chr4:115000001, elapsed 0.2s, est remaining 0.6s, peak mem 114MB, user 0.5s, sys 5.6s, output queue size 8
progress 30% @chr5:80000001, elapsed 0.3s, est remaining 0.6s, peak mem 114MB, user 0.6s, sys 6.8s, output queue size 6
progress 35% @chr6:63000001, elapsed 0.3s, est remaining 0.5s, peak mem 114MB, user 0.8s, sys 8.0s, output queue size 6
progress 40% @chr7:48000001, elapsed 0.3s, est remaining 0.5s, peak mem 114MB, user 0.9s, sys 9.1s, output queue size 24
progress 45% @chr8:54000001, elapsed 0.4s, est remaining 0.5s, peak mem 114MB, user 1.0s, sys 10.3s, output queue size 10
progress 50% @chr9:71000001, elapsed 0.4s, est remaining 0.4s, peak mem 114MB, user 1.1s, sys 11.4s, output queue size 6
progress 55% @chr10:117000001, elapsed 0.5s, est remaining 0.4s, peak mem 114MB, user 1.3s, sys 12.6s, output queue size 24
progress 60% @chr11:111000001, elapsed 0.5s, est remaining 0.3s, peak mem 114MB, user 1.4s, sys 14.2s, output queue size 16
progress 65% @chr13:1000001, elapsed 0.6s, est remaining 0.3s, peak mem 114MB, user 1.5s, sys 16.0s, output queue size 19
progress 70% @chr14:42000001, elapsed 0.6s, est remaining 0.3s, peak mem 114MB, user 1.6s, sys 17.8s, output queue size 34
progress 75% @chr16:14000001, elapsed 0.7s, est remaining 0.2s, peak mem 114MB, user 1.7s, sys 19.0s, output queue size 17
progress 80% @chr18:1, elapsed 0.7s, est remaining 0.2s, peak mem 114MB, user 1.7s, sys 19.6s, output queue size 23
progress 85% @chr20:21000001, elapsed 0.7s, est remaining 0.1s, peak mem 114MB, user 1.8s, sys 20.1s, output queue size 1
progress 90% @chrX:41000001, elapsed 0.8s, est remaining 0.1s, peak mem 135MB, user 2.1s, sys 20.5s, output queue size 114
progress 95% @chrY:38000001, elapsed 0.8s, est remaining 0.0s, peak mem 144MB, user 2.5s, sys 20.8s, output queue size 271
progress 100% @chr21:41000001, elapsed 1.4s, est remaining 0.0s, peak mem 159MB, user 4.3s, sys 21.1s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 384
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 50047071
reads: 1001838
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.241 user 10.595 sys 12.060 real
done: 1 calls 0.005 user 0.000 sys 0.010 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.002 user 0.001 sys 1.383 real
idle: 82 calls 0.013 user 0.040 sys 47.383 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 166797312 mem 4.843 user 21.992 sys 2.971 real