File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e9/f481ed0d04bf02896368f4d0793387/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-dhige8bv because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:50:15,437 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:50:16,246 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:50:16,417 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:50:17,367 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:50:17,546 - cnv_pipe.batch.run_model - INFO - Processing cluster 1167 with 189 probes
2026-06-03 21:50:17,934 - cnv_pipe.batch.run_model.cluster1167 - INFO - Child process started for cluster 1167 with 189 probes
2026-06-03 21:51:15,406 - cnv_pipe.batch.run_model.cluster1167 - INFO - Child process finished cluster 1167. Wrote cluster_1167_samples.csv and cluster_1167_params.csv
2026-06-03 21:51:15,408 - cnv_pipe.batch.run_model - INFO - Cluster 1167 finished in 57.86 seconds. Status: SUCCESS