File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ca/6cb982755f55b1a4244af8a90922c8/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-lqn6ylpw because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:51:09,788 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:51:10,741 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:51:10,937 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:51:11,974 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:51:12,130 - cnv_pipe.batch.run_model - INFO - Processing cluster 1429 with 194 probes
2026-06-03 21:51:12,579 - cnv_pipe.batch.run_model.cluster1429 - INFO - Child process started for cluster 1429 with 194 probes
2026-06-03 21:52:17,948 - cnv_pipe.batch.run_model.cluster1429 - INFO - Child process finished cluster 1429. Wrote cluster_1429_samples.csv and cluster_1429_params.csv
2026-06-03 21:52:17,949 - cnv_pipe.batch.run_model - INFO - Cluster 1429 finished in 65.82 seconds. Status: SUCCESS