mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-4k9xs8cr because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:46:52,141 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:46:52,931 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:46:53,099 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:46:54,025 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:46:54,175 - cnv_pipe.batch.run_model - INFO - Processing cluster 45 with 189 probes
2026-06-03 21:46:54,547 - cnv_pipe.batch.run_model.cluster45 - INFO - Child process started for cluster 45 with 189 probes
2026-06-03 21:47:49,269 - cnv_pipe.batch.run_model.cluster45 - INFO - Child process finished cluster 45. Wrote cluster_45_samples.csv and cluster_45_params.csv
2026-06-03 21:47:49,270 - cnv_pipe.batch.run_model - INFO - Cluster 45 finished in 55.10 seconds. Status: SUCCESS