File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/13/622f321cd3c70cec558b353e8994b2/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-x1jyymun because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:50:24,120 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:50:24,924 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:50:25,093 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:50:25,981 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:50:26,046 - cnv_pipe.batch.run_model - INFO - Processing cluster 1207 with 181 probes
2026-06-03 21:50:26,515 - cnv_pipe.batch.run_model.cluster1207 - INFO - Child process started for cluster 1207 with 181 probes
2026-06-03 21:51:21,232 - cnv_pipe.batch.run_model.cluster1207 - INFO - Child process finished cluster 1207. Wrote cluster_1207_samples.csv and cluster_1207_params.csv
2026-06-03 21:51:21,233 - cnv_pipe.batch.run_model - INFO - Cluster 1207 finished in 55.19 seconds. Status: SUCCESS