File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a0/c09b8d48dfc3a229337d1910a18fac/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-7vrrnqhh because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:48:26,393 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:48:27,204 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:48:27,380 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:48:28,372 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:48:28,554 - cnv_pipe.batch.run_model - INFO - Processing cluster 574 with 127 probes
2026-06-03 21:48:28,932 - cnv_pipe.batch.run_model.cluster574 - INFO - Child process started for cluster 574 with 127 probes
2026-06-03 21:49:07,668 - cnv_pipe.batch.run_model.cluster574 - INFO - Child process finished cluster 574. Wrote cluster_574_samples.csv and cluster_574_params.csv
2026-06-03 21:49:07,669 - cnv_pipe.batch.run_model - INFO - Cluster 574 finished in 39.11 seconds. Status: SUCCESS