mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-rhrjd4o3 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:48:41,844 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:48:42,672 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:48:42,848 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:48:43,880 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:48:44,070 - cnv_pipe.batch.run_model - INFO - Processing cluster 663 with 161 probes
2026-06-03 21:48:44,459 - cnv_pipe.batch.run_model.cluster663 - INFO - Child process started for cluster 663 with 161 probes
2026-06-03 21:49:33,595 - cnv_pipe.batch.run_model.cluster663 - INFO - Child process finished cluster 663. Wrote cluster_663_samples.csv and cluster_663_params.csv
2026-06-03 21:49:33,595 - cnv_pipe.batch.run_model - INFO - Cluster 663 finished in 49.53 seconds. Status: SUCCESS