mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-z71wh5r3 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:49:23,450 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:49:24,246 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:49:24,418 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:49:25,313 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:49:25,525 - cnv_pipe.batch.run_model - INFO - Processing cluster 879 with 197 probes
2026-06-03 21:49:25,910 - cnv_pipe.batch.run_model.cluster879 - INFO - Child process started for cluster 879 with 197 probes
2026-06-03 21:50:23,508 - cnv_pipe.batch.run_model.cluster879 - INFO - Child process finished cluster 879. Wrote cluster_879_samples.csv and cluster_879_params.csv
2026-06-03 21:50:23,509 - cnv_pipe.batch.run_model - INFO - Cluster 879 finished in 57.98 seconds. Status: SUCCESS