mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-5g64p13s because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:48:41,196 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:48:42,558 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:48:42,856 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:48:44,713 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:48:44,961 - cnv_pipe.batch.run_model - INFO - Processing cluster 628 with 200 probes
2026-06-03 21:48:45,601 - cnv_pipe.batch.run_model.cluster628 - INFO - Child process started for cluster 628 with 200 probes
2026-06-03 21:50:27,679 - cnv_pipe.batch.run_model.cluster628 - INFO - Child process finished cluster 628. Wrote cluster_628_samples.csv and cluster_628_params.csv
2026-06-03 21:50:27,681 - cnv_pipe.batch.run_model - INFO - Cluster 628 finished in 102.72 seconds. Status: SUCCESS