mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-q107ksnk because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:46:52,855 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:46:53,812 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:46:54,008 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:46:55,187 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:46:55,262 - cnv_pipe.batch.run_model - INFO - Processing cluster 41 with 196 probes
2026-06-03 21:46:55,710 - cnv_pipe.batch.run_model.cluster41 - INFO - Child process started for cluster 41 with 196 probes
2026-06-03 21:48:03,249 - cnv_pipe.batch.run_model.cluster41 - INFO - Child process finished cluster 41. Wrote cluster_41_samples.csv and cluster_41_params.csv
2026-06-03 21:48:03,250 - cnv_pipe.batch.run_model - INFO - Cluster 41 finished in 67.99 seconds. Status: SUCCESS