[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXM4cVlP/chr20_14085521-14085828.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXM4cVlP/chr20_14085521-14085828.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXM4cVlP/chr20_14085521-14085828.bed.gz.tbi
[2026-06-03T21:45:00.329548Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-03T21:45:00.330272Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-03T21:45:00.330282Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-03T21:45:00.330286Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-03T21:45:00.330291Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXM4cVlP'
[2026-06-03T21:45:00.330294Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-03T21:45:00.330299Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-03T21:45:00.330305Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-03T21:45:00.330308Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-06-03T21:45:00.330313Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-03T21:45:00.330317Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-03T21:45:00.330321Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-03T21:45:00.330326Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-03T21:45:00.330329Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-03T21:45:00.330940Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-03T21:45:00.331051Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-03T21:45:00.336794Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-03T21:45:00.337585Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-03T21:45:00.337780Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-03T21:45:00.338132Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-03T21:45:00.338430Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.338872Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.338969Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.339045Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.339166Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.339240Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.339360Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.339423Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.339563Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.339734Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.340150Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.340360Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.340441Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.340649Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.341016Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.341464Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.342524Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.343254Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-03T21:45:00.343490Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.343761Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.343972Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.344042Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.344160Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.344227Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.344337Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.344398Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.344519Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.344589Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.344700Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.344773Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.345039Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.345315Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.345452Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.345519Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.345630Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.345691Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.345805Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.345869Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.345981Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.346041Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.346153Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.346216Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.346333Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.346510Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.346958Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.347034Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.347149Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.347214Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.347383Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.347453Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.347556Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.347626Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.347734Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.347793Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.347960Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.348386Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.348498Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.348561Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.348687Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.348758Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.348868Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.348943Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.349065Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.349131Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.349239Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.349306Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.349501Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.350044Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.350947Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.351398Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.351670Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.352269Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.352855Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.352938Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.354287Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.354905Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.355041Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.355109Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.355222Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.355290Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.355405Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.355468Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.355584Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.355645Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.355755Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.355832Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.356083Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.356692Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.356819Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.356887Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.357024Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.357095Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.357206Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.357272Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.357386Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.357449Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.357568Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.357631Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.372844Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.373529Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.373641Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.373843Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.374883Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.375232Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.375333Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.376027Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.376670Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.377183Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.377785Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.377944Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.378766Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.380842Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.381775Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.382258Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0001] Task initiated on local node
[2026-06-03T21:45:00.382686Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.383188Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.383984Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.384488Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-03T21:45:00.388043Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-06-03T21:45:00.391086Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0003] Task initiated on local node
[2026-06-03T21:45:00.395215Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-06-03T21:45:00.397343Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0014] Task initiated on local node
[2026-06-03T21:45:00.401053Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0002] Task initiated on local node
[2026-06-03T21:45:00.401825Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0006] Task initiated on local node
[2026-06-03T21:45:00.404138Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0011] Task initiated on local node
[2026-06-03T21:45:00.467454Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.468086Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.468967Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.469272Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.474016Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-06-03T21:45:00.476096Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-06-03T21:45:00.584549Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.584631Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.585645Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.585928Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.589073Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-06-03T21:45:00.590316Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0008] Task initiated on local node
[2026-06-03T21:45:00.618384Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.619415Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.622595Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0012] Task initiated on local node
[2026-06-03T21:45:01.285655Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.286809Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.289916Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-06-03T21:45:01.351267Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.352310Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.355123Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-06-03T21:45:01.384389Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.385453Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.388903Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-06-03T21:45:01.417816Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.418728Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.421385Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0016] Task initiated on local node
[2026-06-03T21:45:01.450809Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.450913Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.451867Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.452222Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.455580Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0002] Task initiated on local node
[2026-06-03T21:45:01.456803Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0003] Task initiated on local node
[2026-06-03T21:45:01.617294Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.618389Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.621413Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0003] Task initiated on local node
[2026-06-03T21:45:01.883372Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.884455Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.887392Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0012] Task initiated on local node
[2026-06-03T21:45:01.916733Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.917766Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.920702Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-06-03T21:45:01.982207Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.983257Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.986279Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-06-03T21:45:02.047798Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.048825Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.051822Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0000] Task initiated on local node
[2026-06-03T21:45:02.113023Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.114074Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.117348Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0013] Task initiated on local node
[2026-06-03T21:45:02.178502Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.179497Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.182626Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0002] Task initiated on local node
[2026-06-03T21:45:02.243707Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.244724Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.248196Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0004] Task initiated on local node
[2026-06-03T21:45:02.359427Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.360418Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.363399Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0011] Task initiated on local node
[2026-06-03T21:45:02.424603Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.425609Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.428407Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0002] Task initiated on local node
[2026-06-03T21:45:02.640239Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.641304Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.644417Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-06-03T21:45:02.673384Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.674371Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.677202Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-06-03T21:45:02.738619Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.739544Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.742466Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-06-03T21:45:02.771795Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.773227Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.775900Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0001] Task initiated on local node
[2026-06-03T21:45:02.837494Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.838527Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.841849Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0014] Task initiated on local node
[2026-06-03T21:45:02.902970Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.903994Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.906977Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0005] Task initiated on local node
[2026-06-03T21:45:03.118560Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.119497Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.122568Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0016] Task initiated on local node
[2026-06-03T21:45:03.183877Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.184867Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.187791Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0003] Task initiated on local node
[2026-06-03T21:45:03.217099Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.217165Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.217972Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.218266Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.221478Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0013] Task initiated on local node
[2026-06-03T21:45:03.222491Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-06-03T21:45:03.250979Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.251933Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.255003Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-06-03T21:45:03.284494Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.285473Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.288463Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0009] Task initiated on local node
[2026-06-03T21:45:03.500459Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.501352Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.504407Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0000] Task initiated on local node
[2026-06-03T21:45:03.615782Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.616773Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.620104Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0000] Task initiated on local node
[2026-06-03T21:45:03.633041Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.633947Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.636790Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0003] Task initiated on local node
[2026-06-03T21:45:03.698360Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.699315Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.702883Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0001] Task initiated on local node
[2026-06-03T21:45:03.763699Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.764568Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.767772Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0002] Task initiated on local node
[2026-06-03T21:45:03.828883Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.829893Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.832897Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-06-03T21:45:03.894406Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.895427Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.898510Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-06-03T21:45:03.960226Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.961245Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.964499Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-06-03T21:45:03.977357Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.978250Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.981622Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0006] Task initiated on local node
[2026-06-03T21:45:04.042955Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.043108Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.043961Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.044319Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.047677Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-06-03T21:45:04.048600Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-06-03T21:45:04.108706Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.108785Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.109668Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.109981Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.113670Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0003] Task initiated on local node
[2026-06-03T21:45:04.114836Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0010] Task initiated on local node
[2026-06-03T21:45:04.174547Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.174631Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.175444Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.175750Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.179270Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-06-03T21:45:04.180309Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0005] Task initiated on local node
[2026-06-03T21:45:04.240419Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.241373Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.244909Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0003] Task initiated on local node
[2026-06-03T21:45:04.356467Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.357916Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.361322Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0008] Task initiated on local node
[2026-06-03T21:45:04.422609Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.422790Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.424490Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.424948Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.429226Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-06-03T21:45:04.431418Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0007] Task initiated on local node
[2026-06-03T21:45:04.540412Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.541477Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.544878Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0000] Task initiated on local node
[2026-06-03T21:45:04.606097Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.606989Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.610337Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-06-03T21:45:04.722021Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.722961Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.726658Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0001] Task initiated on local node
[2026-06-03T21:45:04.787690Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.788769Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.792705Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0000] Task initiated on local node
[2026-06-03T21:45:04.854301Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.855192Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.859167Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0004] Task initiated on local node
[2026-06-03T21:45:04.871469Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.872243Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.875684Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-06-03T21:45:04.904839Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.905829Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.909751Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0007] Task initiated on local node
[2026-06-03T21:45:04.970697Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.970779Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.971558Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.971826Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.975919Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0001] Task initiated on local node
[2026-06-03T21:45:04.976954Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0004] Task initiated on local node
[2026-06-03T21:45:05.087253Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.088289Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.092514Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0009] Task initiated on local node
[2026-06-03T21:45:05.153203Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.154158Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.157637Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0002] Task initiated on local node
[2026-06-03T21:45:05.971218Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.972213Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.975543Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0005] Task initiated on local node
[2026-06-03T21:45:06.036726Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.037710Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.041204Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-06-03T21:45:06.102314Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.103388Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.106786Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0015] Task initiated on local node
[2026-06-03T21:45:06.468909Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.469657Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.473025Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-06-03T21:45:06.534292Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.535503Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.539068Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-06-03T21:45:06.650726Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.651621Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.654985Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-06-03T21:45:06.716375Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.717238Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.720966Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0001] Task initiated on local node
[2026-06-03T21:45:07.183546Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.183672Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.184438Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.184792Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.188742Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0010] Task initiated on local node
[2026-06-03T21:45:07.189985Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0001] Task initiated on local node
[2026-06-03T21:45:07.249530Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.249662Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.250527Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.250847Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.254318Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0002] Task initiated on local node
[2026-06-03T21:45:07.255386Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-06-03T21:45:07.315452Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.315598Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.316694Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.317319Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.320685Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0005] Task initiated on local node
[2026-06-03T21:45:07.322052Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0000] Task initiated on local node
[2026-06-03T21:45:07.381594Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.381707Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.382510Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.382862Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.386421Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_002_chr3_0000] Task initiated on local node
[2026-06-03T21:45:07.387484Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-06-03T21:45:07.447431Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.448615Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.449175Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.450006Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.453233Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0000] Task initiated on local node
[2026-06-03T21:45:07.454421Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0004] Task initiated on local node
[2026-06-03T21:45:07.514282Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.515189Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.518430Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-06-03T21:45:07.579530Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.580393Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.584002Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0000] Task initiated on local node
[2026-06-03T21:45:07.588771Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.589535Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.592504Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0004] Task initiated on local node
[2026-06-03T21:45:07.621702Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.625726Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.840424Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.841054Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.843940Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0001] Task initiated on local node
[2026-06-03T21:45:07.857110Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.857748Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.860829Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-06-03T21:45:07.922328Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.922427Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.987001Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.987631Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.990227Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0015] Task initiated on local node
[2026-06-03T21:45:08.019849Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.134522Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.135147Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.137743Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0002] Task initiated on local node
[2026-06-03T21:45:08.167436Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.388572Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.389170Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.391963Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0004] Task initiated on local node
[2026-06-03T21:45:10.421405Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.595771Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.596293Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.598869Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0003] Task initiated on local node
[2026-06-03T21:45:14.628073Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.628359Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.628490Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.628795Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.629168Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.633965Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-03T21:45:14.634322Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-03T21:45:14.635056Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-03T21:45:14.661337Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.661396Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.661418Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.661613Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.661949Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.664415Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-03T21:45:14.688749Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-03T21:45:14.694100Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.694152Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.694322Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.697244Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-03T21:45:14.726104Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:19.300519Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-03T21:45:33.449697Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-03T21:45:33.449697Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner]
[2026-06-03T21:45:33.449697Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] workflow version: 2.9.10
[2026-06-03T21:45:33.449762Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner]
[2026-06-03T21:45:33.449768Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-03T21:45:33.449775Z] [nf-e1d00562eddc28b6fb4e1ac095431b88-08e7a-2f942] [587_1] [WorkflowRunner] Elapsed time for full workflow: 33 sec