mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-2tlssjka because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:46:42,929 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:46:43,721 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:46:43,890 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:46:44,810 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:46:44,962 - cnv_pipe.batch.run_model - INFO - Processing cluster 4 with 179 probes
2026-06-03 21:46:45,331 - cnv_pipe.batch.run_model.cluster4 - INFO - Child process started for cluster 4 with 179 probes
2026-06-03 21:47:39,740 - cnv_pipe.batch.run_model.cluster4 - INFO - Child process finished cluster 4. Wrote cluster_4_samples.csv and cluster_4_params.csv
2026-06-03 21:47:39,741 - cnv_pipe.batch.run_model - INFO - Cluster 4 finished in 54.78 seconds. Status: SUCCESS