File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/75/cc33d933988d4d55253d973fff85fc/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-51i95j82 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:50:46,636 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:50:47,435 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:50:47,604 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:50:48,567 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:50:48,762 - cnv_pipe.batch.run_model - INFO - Processing cluster 1320 with 180 probes
2026-06-03 21:50:49,133 - cnv_pipe.batch.run_model.cluster1320 - INFO - Child process started for cluster 1320 with 180 probes
2026-06-03 21:51:43,448 - cnv_pipe.batch.run_model.cluster1320 - INFO - Child process finished cluster 1320. Wrote cluster_1320_samples.csv and cluster_1320_params.csv
2026-06-03 21:51:43,450 - cnv_pipe.batch.run_model - INFO - Cluster 1320 finished in 54.69 seconds. Status: SUCCESS