File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2f/41757d5d99e4f1d0756a485f291842/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-3tnd2we_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:50:44,508 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:50:45,346 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:50:45,520 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:50:46,521 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:50:46,699 - cnv_pipe.batch.run_model - INFO - Processing cluster 1307 with 192 probes
2026-06-03 21:50:47,078 - cnv_pipe.batch.run_model.cluster1307 - INFO - Child process started for cluster 1307 with 192 probes
2026-06-03 21:51:42,679 - cnv_pipe.batch.run_model.cluster1307 - INFO - Child process finished cluster 1307. Wrote cluster_1307_samples.csv and cluster_1307_params.csv
2026-06-03 21:51:42,681 - cnv_pipe.batch.run_model - INFO - Cluster 1307 finished in 55.98 seconds. Status: SUCCESS