File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e9/3b1cd8e317c5138098ffb7b617618c/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-oj2ixqpo because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:50:27,389 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:50:28,199 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:50:28,384 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:50:29,352 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:50:29,576 - cnv_pipe.batch.run_model - INFO - Processing cluster 1221 with 180 probes
2026-06-03 21:50:29,952 - cnv_pipe.batch.run_model.cluster1221 - INFO - Child process started for cluster 1221 with 180 probes
2026-06-03 21:51:22,511 - cnv_pipe.batch.run_model.cluster1221 - INFO - Child process finished cluster 1221. Wrote cluster_1221_samples.csv and cluster_1221_params.csv
2026-06-03 21:51:22,512 - cnv_pipe.batch.run_model - INFO - Cluster 1221 finished in 52.94 seconds. Status: SUCCESS