mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-r7rn7k1b because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:48:19,273 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:48:20,124 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:48:20,308 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:48:21,427 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:48:21,503 - cnv_pipe.batch.run_model - INFO - Processing cluster 533 with 197 probes
2026-06-03 21:48:21,894 - cnv_pipe.batch.run_model.cluster533 - INFO - Child process started for cluster 533 with 197 probes
2026-06-03 21:49:21,272 - cnv_pipe.batch.run_model.cluster533 - INFO - Child process finished cluster 533. Wrote cluster_533_samples.csv and cluster_533_params.csv
2026-06-03 21:49:21,274 - cnv_pipe.batch.run_model - INFO - Cluster 533 finished in 59.77 seconds. Status: SUCCESS