File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/12/e9c47d3a60119de2ce5ec90cb66e1c/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-0p4r88n1 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:50:57,959 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:50:59,261 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:50:59,540 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:51:01,219 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:51:01,450 - cnv_pipe.batch.run_model - INFO - Processing cluster 1352 with 184 probes
2026-06-03 21:51:02,059 - cnv_pipe.batch.run_model.cluster1352 - INFO - Child process started for cluster 1352 with 184 probes
2026-06-03 21:52:27,197 - cnv_pipe.batch.run_model.cluster1352 - INFO - Child process finished cluster 1352. Wrote cluster_1352_samples.csv and cluster_1352_params.csv
2026-06-03 21:52:27,198 - cnv_pipe.batch.run_model - INFO - Cluster 1352 finished in 85.75 seconds. Status: SUCCESS