mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ch1knzkr because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:48:16,172 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:48:16,985 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:48:17,154 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:48:18,140 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:48:18,216 - cnv_pipe.batch.run_model - INFO - Processing cluster 515 with 198 probes
2026-06-03 21:48:18,634 - cnv_pipe.batch.run_model.cluster515 - INFO - Child process started for cluster 515 with 198 probes
2026-06-03 21:49:14,966 - cnv_pipe.batch.run_model.cluster515 - INFO - Child process finished cluster 515. Wrote cluster_515_samples.csv and cluster_515_params.csv
2026-06-03 21:49:14,967 - cnv_pipe.batch.run_model - INFO - Cluster 515 finished in 56.75 seconds. Status: SUCCESS