File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3d/a544b8e0d5337bc20c14a2f774d09e/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-tr0oh71g because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:50:12,684 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:50:13,496 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:50:13,665 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:50:14,584 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:50:14,748 - cnv_pipe.batch.run_model - INFO - Processing cluster 1149 with 191 probes
2026-06-03 21:50:15,148 - cnv_pipe.batch.run_model.cluster1149 - INFO - Child process started for cluster 1149 with 191 probes
2026-06-03 21:51:11,958 - cnv_pipe.batch.run_model.cluster1149 - INFO - Child process finished cluster 1149. Wrote cluster_1149_samples.csv and cluster_1149_params.csv
2026-06-03 21:51:11,959 - cnv_pipe.batch.run_model - INFO - Cluster 1149 finished in 57.21 seconds. Status: SUCCESS