File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bd/b856597fde065c8eea3a2872d6f918/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-mdlok6v5 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:50:46,447 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:50:47,256 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:50:47,431 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:50:48,394 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:50:48,589 - cnv_pipe.batch.run_model - INFO - Processing cluster 1319 with 187 probes
2026-06-03 21:50:48,961 - cnv_pipe.batch.run_model.cluster1319 - INFO - Child process started for cluster 1319 with 187 probes
2026-06-03 21:51:45,497 - cnv_pipe.batch.run_model.cluster1319 - INFO - Child process finished cluster 1319. Wrote cluster_1319_samples.csv and cluster_1319_params.csv
2026-06-03 21:51:45,498 - cnv_pipe.batch.run_model - INFO - Cluster 1319 finished in 56.91 seconds. Status: SUCCESS