mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-kzctarks because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:48:13,157 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:48:14,114 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:48:14,311 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:48:15,405 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:48:15,571 - cnv_pipe.batch.run_model - INFO - Processing cluster 491 with 175 probes
2026-06-03 21:48:16,040 - cnv_pipe.batch.run_model.cluster491 - INFO - Child process started for cluster 491 with 175 probes
2026-06-03 21:49:18,476 - cnv_pipe.batch.run_model.cluster491 - INFO - Child process finished cluster 491. Wrote cluster_491_samples.csv and cluster_491_params.csv
2026-06-03 21:49:18,477 - cnv_pipe.batch.run_model - INFO - Cluster 491 finished in 62.91 seconds. Status: SUCCESS