mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-vv5killh because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:48:18,902 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:48:19,886 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:48:20,092 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:48:21,226 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:48:21,394 - cnv_pipe.batch.run_model - INFO - Processing cluster 522 with 169 probes
2026-06-03 21:48:21,856 - cnv_pipe.batch.run_model.cluster522 - INFO - Child process started for cluster 522 with 169 probes
2026-06-03 21:49:21,544 - cnv_pipe.batch.run_model.cluster522 - INFO - Child process finished cluster 522. Wrote cluster_522_samples.csv and cluster_522_params.csv
2026-06-03 21:49:21,545 - cnv_pipe.batch.run_model - INFO - Cluster 522 finished in 60.15 seconds. Status: SUCCESS