mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-tzbml5zy because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:48:34,761 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:48:35,681 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:48:35,865 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:48:36,952 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:48:37,023 - cnv_pipe.batch.run_model - INFO - Processing cluster 624 with 170 probes
2026-06-03 21:48:37,403 - cnv_pipe.batch.run_model.cluster624 - INFO - Child process started for cluster 624 with 170 probes
2026-06-03 21:49:29,391 - cnv_pipe.batch.run_model.cluster624 - INFO - Child process finished cluster 624. Wrote cluster_624_samples.csv and cluster_624_params.csv
2026-06-03 21:49:29,391 - cnv_pipe.batch.run_model - INFO - Cluster 624 finished in 52.37 seconds. Status: SUCCESS