File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/71/afbee4265ccab4de8583d1670dda33/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-gdeyc8yr because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:47:05,962 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:47:06,745 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:47:06,912 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:47:07,793 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:47:07,948 - cnv_pipe.batch.run_model - INFO - Processing cluster 122 with 180 probes
2026-06-03 21:47:08,323 - cnv_pipe.batch.run_model.cluster122 - INFO - Child process started for cluster 122 with 180 probes
2026-06-03 21:47:59,605 - cnv_pipe.batch.run_model.cluster122 - INFO - Child process finished cluster 122. Wrote cluster_122_samples.csv and cluster_122_params.csv
2026-06-03 21:47:59,606 - cnv_pipe.batch.run_model - INFO - Cluster 122 finished in 51.66 seconds. Status: SUCCESS