File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7f/62cd246b53fe01d5f6deb9f19c0f02/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-dl0_7s5g because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:49:48,693 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:49:49,524 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:49:49,699 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:49:50,682 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:49:50,860 - cnv_pipe.batch.run_model - INFO - Processing cluster 1010 with 196 probes
2026-06-03 21:49:51,266 - cnv_pipe.batch.run_model.cluster1010 - INFO - Child process started for cluster 1010 with 196 probes
2026-06-03 21:50:49,484 - cnv_pipe.batch.run_model.cluster1010 - INFO - Child process finished cluster 1010. Wrote cluster_1010_samples.csv and cluster_1010_params.csv
2026-06-03 21:50:49,485 - cnv_pipe.batch.run_model - INFO - Cluster 1010 finished in 58.62 seconds. Status: SUCCESS