File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d9/7ec456e31f62599099886c48ecfda9/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-oc__a5pb because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:49:27,441 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:49:28,239 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:49:28,404 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:49:29,284 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:49:29,439 - cnv_pipe.batch.run_model - INFO - Processing cluster 898 with 143 probes
2026-06-03 21:49:29,821 - cnv_pipe.batch.run_model.cluster898 - INFO - Child process started for cluster 898 with 143 probes
2026-06-03 21:50:13,452 - cnv_pipe.batch.run_model.cluster898 - INFO - Child process finished cluster 898. Wrote cluster_898_samples.csv and cluster_898_params.csv
2026-06-03 21:50:13,453 - cnv_pipe.batch.run_model - INFO - Cluster 898 finished in 44.01 seconds. Status: SUCCESS