File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/78/03c7faeb758388019d66559b2654f3/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-dowdtu73 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:50:46,568 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:50:47,584 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:50:47,784 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:50:48,971 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:50:49,165 - cnv_pipe.batch.run_model - INFO - Processing cluster 1309 with 144 probes
2026-06-03 21:50:49,640 - cnv_pipe.batch.run_model.cluster1309 - INFO - Child process started for cluster 1309 with 144 probes
2026-06-03 21:51:47,666 - cnv_pipe.batch.run_model.cluster1309 - INFO - Child process finished cluster 1309. Wrote cluster_1309_samples.csv and cluster_1309_params.csv
2026-06-03 21:51:47,667 - cnv_pipe.batch.run_model - INFO - Cluster 1309 finished in 58.50 seconds. Status: SUCCESS