File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/09/56be6641eed20feaedf9ace2234540/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-_ys8de6w because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:49:14,324 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:49:15,698 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:49:15,992 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:49:17,899 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:49:18,013 - cnv_pipe.batch.run_model - INFO - Processing cluster 796 with 188 probes
2026-06-03 21:49:18,777 - cnv_pipe.batch.run_model.cluster796 - INFO - Child process started for cluster 796 with 188 probes
2026-06-03 21:50:55,162 - cnv_pipe.batch.run_model.cluster796 - INFO - Child process finished cluster 796. Wrote cluster_796_samples.csv and cluster_796_params.csv
2026-06-03 21:50:55,165 - cnv_pipe.batch.run_model - INFO - Cluster 796 finished in 97.15 seconds. Status: SUCCESS