File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2f/5af5903b8b89fb3a712272e792cfe9/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-urdpz9ia because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:51:04,958 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:51:05,746 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:51:05,913 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:51:06,813 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:51:06,888 - cnv_pipe.batch.run_model - INFO - Processing cluster 1413 with 191 probes
2026-06-03 21:51:07,338 - cnv_pipe.batch.run_model.cluster1413 - INFO - Child process started for cluster 1413 with 191 probes
2026-06-03 21:52:02,071 - cnv_pipe.batch.run_model.cluster1413 - INFO - Child process finished cluster 1413. Wrote cluster_1413_samples.csv and cluster_1413_params.csv
2026-06-03 21:52:02,072 - cnv_pipe.batch.run_model - INFO - Cluster 1413 finished in 55.18 seconds. Status: SUCCESS