[2026-06-03T21:45:01.509113Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-03T21:45:01.520655Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-03T21:45:01.520681Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-03T21:45:01.520690Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-03T21:45:01.520698Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXX7Johsf'
[2026-06-03T21:45:01.520706Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-03T21:45:01.520718Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-03T21:45:01.520725Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-03T21:45:01.520732Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] [RunParameters] memMb: 773642
[2026-06-03T21:45:01.520739Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-03T21:45:01.520749Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-03T21:45:01.520756Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-03T21:45:01.520764Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-03T21:45:01.520771Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-03T21:45:01.521343Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-03T21:45:01.521441Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-03T21:45:01.531131Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-03T21:45:01.531800Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-03T21:45:01.531941Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-03T21:45:01.532104Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-03T21:45:01.532305Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.532897Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.533052Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.533184Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.533569Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.533877Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.534058Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.534295Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.534614Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.535147Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.535389Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.535906Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.536131Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.536430Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.536636Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.539092Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.539597Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-03T21:45:01.539652Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.539905Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.540035Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.540371Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.540518Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.541155Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.541297Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.541516Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.541640Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.541861Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.541989Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.542221Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.542414Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.543107Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.543243Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.543468Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.543591Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.543808Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.543934Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.544722Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.544864Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.545088Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.545217Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.545435Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.545559Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.546420Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.546575Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.546839Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.546992Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.547240Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.547499Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.547827Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.548606Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.548854Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.549000Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.549243Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.549384Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.549678Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.550634Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.551745Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.551938Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.552179Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.552334Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.552574Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.552713Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.553872Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.554050Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.554292Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.554446Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.554687Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.554887Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.557069Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.557302Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.558557Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.559732Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.560009Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.560187Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.563118Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.563288Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.563548Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.563694Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.563935Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.564067Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.565495Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.565638Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.565893Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.566041Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.566277Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.566429Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.568045Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.568220Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.568456Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.568596Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.568833Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.568975Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.570579Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.570747Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.570998Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.571143Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.571386Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.571528Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.593704Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.594007Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.595545Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.596025Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.596116Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.597681Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.597920Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.598181Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.598530Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.598644Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.599024Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.599275Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-03T21:45:01.599624Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.599790Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-03T21:45:01.600193Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.600929Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.601919Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.602793Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.603518Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.608266Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0001] Task initiated on local node
[2026-06-03T21:45:01.613871Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-06-03T21:45:01.618667Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0014] Task initiated on local node
[2026-06-03T21:45:01.621439Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0012] Task initiated on local node
[2026-06-03T21:45:01.623289Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-06-03T21:45:01.624735Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0003] Task initiated on local node
[2026-06-03T21:45:01.625014Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0016] Task initiated on local node
[2026-06-03T21:45:01.626137Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-06-03T21:45:01.725583Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.725675Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.725720Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.727257Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.727557Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.727947Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.733499Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-06-03T21:45:01.735153Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-06-03T21:45:01.736081Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-06-03T21:45:01.794398Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.795994Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.800008Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0013] Task initiated on local node
[2026-06-03T21:45:01.828415Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.828485Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.829961Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.830526Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.834653Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0011] Task initiated on local node
[2026-06-03T21:45:01.835278Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-06-03T21:45:01.945850Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.947523Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.951756Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0002] Task initiated on local node
[2026-06-03T21:45:03.566529Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.569075Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.572623Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-06-03T21:45:03.633505Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.636144Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.639520Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0003] Task initiated on local node
[2026-06-03T21:45:03.640424Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.642731Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.646002Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-06-03T21:45:03.757223Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.759780Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.762978Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-06-03T21:45:03.824141Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.824278Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.826793Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.827321Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.831150Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0001] Task initiated on local node
[2026-06-03T21:45:03.832453Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0006] Task initiated on local node
[2026-06-03T21:45:03.891936Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.894430Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.897746Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0014] Task initiated on local node
[2026-06-03T21:45:03.958792Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.960385Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.964033Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0000] Task initiated on local node
[2026-06-03T21:45:04.025070Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.026728Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.030083Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0012] Task initiated on local node
[2026-06-03T21:45:04.059115Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.060690Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.064369Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0008] Task initiated on local node
[2026-06-03T21:45:04.068845Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.070287Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.073969Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-06-03T21:45:04.736880Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.738455Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.742065Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-06-03T21:45:04.803049Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.804602Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.808471Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0000] Task initiated on local node
[2026-06-03T21:45:05.221026Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.222574Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.226002Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-06-03T21:45:05.337316Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.339000Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.342671Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-06-03T21:45:05.403450Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.403564Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.405017Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.405392Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.410260Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0003] Task initiated on local node
[2026-06-03T21:45:05.411473Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0009] Task initiated on local node
[2026-06-03T21:45:05.413645Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.414962Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.418249Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0016] Task initiated on local node
[2026-06-03T21:45:05.479276Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.480728Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.483328Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.484515Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0001] Task initiated on local node
[2026-06-03T21:45:05.485161Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.488396Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0006] Task initiated on local node
[2026-06-03T21:45:05.549308Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.550735Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.554390Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0005] Task initiated on local node
[2026-06-03T21:45:05.715786Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.717288Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.720941Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0000] Task initiated on local node
[2026-06-03T21:45:05.782064Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.783490Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.787387Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-06-03T21:45:05.898663Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.900096Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.903740Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0013] Task initiated on local node
[2026-06-03T21:45:05.916283Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.917667Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.921261Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0000] Task initiated on local node
[2026-06-03T21:45:05.950323Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.951690Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.955442Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-06-03T21:45:06.016417Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.017842Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.021743Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0000] Task initiated on local node
[2026-06-03T21:45:06.050613Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.051980Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.055596Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-06-03T21:45:06.060083Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.061355Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.064898Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0010] Task initiated on local node
[2026-06-03T21:45:06.093685Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.094989Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.098536Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0001] Task initiated on local node
[2026-06-03T21:45:06.911888Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.913125Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.916696Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0001] Task initiated on local node
[2026-06-03T21:45:06.977702Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.979025Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.982510Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0011] Task initiated on local node
[2026-06-03T21:45:07.043647Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.044997Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.048545Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0003] Task initiated on local node
[2026-06-03T21:45:07.109514Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.110839Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.114276Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-06-03T21:45:07.175339Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.176777Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.180429Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0004] Task initiated on local node
[2026-06-03T21:45:07.693496Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.694740Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.698825Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0003] Task initiated on local node
[2026-06-03T21:45:07.759195Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.760498Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.763862Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-06-03T21:45:07.824779Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.826077Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.829021Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0003] Task initiated on local node
[2026-06-03T21:45:08.040674Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.041886Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.045536Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-06-03T21:45:08.106544Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.107853Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.111088Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0005] Task initiated on local node
[2026-06-03T21:45:08.123886Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.125034Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.128269Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-06-03T21:45:08.189467Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.190687Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.194087Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-06-03T21:45:08.806990Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.808182Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.811499Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0001] Task initiated on local node
[2026-06-03T21:45:08.872480Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.874329Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.877350Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0007] Task initiated on local node
[2026-06-03T21:45:09.138880Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.140766Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.144142Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0009] Task initiated on local node
[2026-06-03T21:45:09.205048Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.206965Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.210132Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0001] Task initiated on local node
[2026-06-03T21:45:09.214944Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.215943Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.219613Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-06-03T21:45:09.330851Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.332006Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.335311Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-06-03T21:45:09.396546Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.397665Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.400955Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0002] Task initiated on local node
[2026-06-03T21:45:09.462239Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.463289Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.466672Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0002] Task initiated on local node
[2026-06-03T21:45:09.527731Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.528815Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.532383Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-06-03T21:45:09.643562Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.644645Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.648169Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0007] Task initiated on local node
[2026-06-03T21:45:09.709191Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.710297Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.713755Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0000] Task initiated on local node
[2026-06-03T21:45:10.226193Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.227274Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.230952Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0004] Task initiated on local node
[2026-06-03T21:45:10.392162Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.393232Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.396438Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0010] Task initiated on local node
[2026-06-03T21:45:10.457569Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.458589Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.462187Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0002] Task initiated on local node
[2026-06-03T21:45:10.774085Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.775153Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.778694Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0001] Task initiated on local node
[2026-06-03T21:45:10.839582Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.840572Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.843970Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-06-03T21:45:10.905223Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.906242Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.909661Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0002] Task initiated on local node
[2026-06-03T21:45:10.970885Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.971871Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.975402Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0015] Task initiated on local node
[2026-06-03T21:45:11.537659Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.538624Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.541673Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0002] Task initiated on local node
[2026-06-03T21:45:11.602971Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.603922Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.607652Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0005] Task initiated on local node
[2026-06-03T21:45:11.668299Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.669275Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.672632Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0004] Task initiated on local node
[2026-06-03T21:45:11.733828Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.734815Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.738382Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0000] Task initiated on local node
[2026-06-03T21:45:11.799397Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.799514Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.800400Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.800762Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.804488Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-06-03T21:45:11.805304Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-06-03T21:45:11.865385Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.865494Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.866335Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.866734Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.870163Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-06-03T21:45:11.871004Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0008] Task initiated on local node
[2026-06-03T21:45:11.931137Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.931271Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.932104Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.932489Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.935765Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_002_chr3_0000] Task initiated on local node
[2026-06-03T21:45:11.937190Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-06-03T21:45:11.997036Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.997941Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.000976Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0000] Task initiated on local node
[2026-06-03T21:45:12.013975Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.014818Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.018864Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-06-03T21:45:12.046954Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.047808Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.051102Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0004] Task initiated on local node
[2026-06-03T21:45:12.055925Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.056715Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.059911Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0005] Task initiated on local node
[2026-06-03T21:45:12.121141Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.122015Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.125226Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0003] Task initiated on local node
[2026-06-03T21:45:12.154192Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.154993Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.158404Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-06-03T21:45:12.162922Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.166739Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.167363Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.170534Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0002] Task initiated on local node
[2026-06-03T21:45:12.199479Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.207488Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:13.324757Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:13.325529Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:13.328757Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0004] Task initiated on local node
[2026-06-03T21:45:13.389978Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:13.655018Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:13.655821Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-03T21:45:13.658841Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0015] Task initiated on local node
[2026-06-03T21:45:13.720105Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.035144Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.035907Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.038724Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0002] Task initiated on local node
[2026-06-03T21:45:14.100080Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:16.470019Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:16.470810Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:16.473690Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0004] Task initiated on local node
[2026-06-03T21:45:16.534833Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:23.555465Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:23.556321Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:23.559041Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0003] Task initiated on local node
[2026-06-03T21:45:23.620549Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:23.621277Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:23.621432Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-03T21:45:23.621858Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-03T21:45:23.622198Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-03T21:45:23.627957Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-03T21:45:23.629485Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-03T21:45:23.630144Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-03T21:45:23.686971Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:23.687040Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:23.687088Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:23.687379Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-03T21:45:23.687786Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-03T21:45:23.691189Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-03T21:45:23.692407Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-03T21:45:23.752445Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:23.752596Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:23.752946Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-03T21:45:23.756201Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-03T21:45:23.817911Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:34.785982Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-03T21:45:49.641334Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-03T21:45:49.641334Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] 
[2026-06-03T21:45:49.641334Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-03T21:45:49.641398Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] 
[2026-06-03T21:45:49.641409Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-03T21:45:49.641420Z] [nf-0dffd98004ffe22718e2258895a03644-29439-pwhh7] [768_1] [WorkflowRunner] Elapsed time for full workflow: 48 sec