File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/54/feee377997101861535bd0307528ca/.command.err
Size
86.1 KB
Task
DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (negative_somatic_control_1;chr4_22420786-22421189.bed)
Attempt

Content

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[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXFApanR/chr4_22420786-22421189.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXFApanR/chr4_22420786-22421189.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXFApanR/chr4_22420786-22421189.bed.gz.tbi
[2026-06-03T21:45:03.828467Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-03T21:45:03.840395Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-03T21:45:03.840424Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-03T21:45:03.840431Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-03T21:45:03.840437Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXFApanR'
[2026-06-03T21:45:03.840444Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-03T21:45:03.840452Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-03T21:45:03.840458Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-03T21:45:03.840464Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-06-03T21:45:03.840470Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-03T21:45:03.840476Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-03T21:45:03.840481Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-03T21:45:03.840488Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-03T21:45:03.840493Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-03T21:45:03.840977Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-03T21:45:03.841099Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-03T21:45:03.846865Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-03T21:45:03.847468Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-03T21:45:03.847862Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-03T21:45:03.848036Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-03T21:45:03.848190Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.848710Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.848800Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.848871Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.848987Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.849053Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.849406Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.849694Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.849836Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.849990Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.850148Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.850265Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.850342Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.851053Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.851521Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.853333Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.853750Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.853937Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.854001Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.854123Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-03T21:45:03.854390Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.854470Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.854588Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.854705Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.855068Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.855132Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.855247Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.855311Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.855420Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.855487Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.855603Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.855705Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.855828Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.855892Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.856009Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.856140Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.856398Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.856893Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.857406Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.857722Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.857836Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.857899Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.858010Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.858073Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.858178Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.858243Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.858366Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.858482Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.858596Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.858663Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.858878Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.859273Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.859382Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.859443Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.859552Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.859634Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.859776Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.859849Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.859957Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.860019Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.860130Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.860191Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.860423Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.860876Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.860991Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.861058Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.861171Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.861234Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.861344Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.861411Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.861521Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.861586Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.861692Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.861755Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.863185Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.863822Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.863958Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.864029Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.864144Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.864209Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.864320Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.864384Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.864494Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.864558Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.864667Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.864754Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.865084Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.865641Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.865754Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.865818Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.865931Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.865997Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.866105Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.866171Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.866285Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.866350Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.881725Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.882003Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.882887Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.883016Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.883198Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.883676Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.884203Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.884367Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.885025Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.885212Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.885906Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.886426Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.886762Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.887964Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.888409Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.889302Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.889518Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.890260Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-03T21:45:03.890991Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.894539Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-06-03T21:45:03.896081Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-06-03T21:45:03.900320Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-06-03T21:45:03.902697Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0000] Task initiated on local node
[2026-06-03T21:45:03.907433Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0014] Task initiated on local node
[2026-06-03T21:45:03.908126Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-06-03T21:45:03.911971Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-06-03T21:45:03.912683Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-06-03T21:45:04.480024Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.481086Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.484343Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-06-03T21:45:04.796441Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.797548Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.800925Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0003] Task initiated on local node
[2026-06-03T21:45:04.861891Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.863278Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.863571Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.866034Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.866461Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0014] Task initiated on local node
[2026-06-03T21:45:04.869195Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0008] Task initiated on local node
[2026-06-03T21:45:04.898140Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.899117Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.902057Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-06-03T21:45:05.063731Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.064777Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.068161Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-06-03T21:45:05.179449Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.179542Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.180593Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.181117Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.184960Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-06-03T21:45:05.185864Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-06-03T21:45:05.346272Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.347336Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.350817Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-06-03T21:45:05.411905Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.412913Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.416293Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-06-03T21:45:05.445134Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.446118Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.448863Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-06-03T21:45:05.510426Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.511422Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.514202Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-06-03T21:45:05.543469Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.544446Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.547132Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-06-03T21:45:05.576413Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.577359Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.580191Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-06-03T21:45:05.609425Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.610419Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.613361Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-06-03T21:45:05.642598Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.643528Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.646436Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0015] Task initiated on local node
[2026-06-03T21:45:05.707963Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.708959Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.711759Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_003_chr4_0000] Task initiated on local node
[2026-06-03T21:45:05.773226Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.774205Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.777524Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0005] Task initiated on local node
[2026-06-03T21:45:05.806520Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.807459Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.810530Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-06-03T21:45:06.122848Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.122942Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.123902Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.124462Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.128017Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-06-03T21:45:06.129120Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-06-03T21:45:06.189036Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.190051Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.193292Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-06-03T21:45:06.222292Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.223206Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.226377Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0010] Task initiated on local node
[2026-06-03T21:45:06.226826Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.227529Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.230238Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-06-03T21:45:06.259836Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.260722Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.263926Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-06-03T21:45:06.292930Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.293838Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.299513Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-06-03T21:45:06.358134Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.359065Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.362014Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0003] Task initiated on local node
[2026-06-03T21:45:06.423234Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.424199Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.427204Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0008] Task initiated on local node
[2026-06-03T21:45:06.456368Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.456462Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.457282Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.457550Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.460678Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-06-03T21:45:06.461685Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0009] Task initiated on local node
[2026-06-03T21:45:06.489840Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.490705Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.493321Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-06-03T21:45:06.522628Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.523486Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.526398Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-06-03T21:45:06.555528Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.556395Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.559045Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-06-03T21:45:06.588628Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.589489Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.592881Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0007] Task initiated on local node
[2026-06-03T21:45:06.904852Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.905724Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.908566Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-06-03T21:45:06.938105Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.938987Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.942286Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-06-03T21:45:07.103775Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.103885Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.104712Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.105223Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.108134Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-06-03T21:45:07.109280Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0010] Task initiated on local node
[2026-06-03T21:45:07.137582Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.137702Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.138476Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.138762Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.142119Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0012] Task initiated on local node
[2026-06-03T21:45:07.143231Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-06-03T21:45:07.353716Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.354689Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.357645Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0000] Task initiated on local node
[2026-06-03T21:45:07.370495Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.371320Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.374239Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-06-03T21:45:07.387364Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.388165Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.390792Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0015] Task initiated on local node
[2026-06-03T21:45:07.391726Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.392391Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.394777Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0005] Task initiated on local node
[2026-06-03T21:45:07.408070Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.408906Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.411633Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-06-03T21:45:07.424692Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.425727Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.425936Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.428175Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.428984Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0006] Task initiated on local node
[2026-06-03T21:45:07.431201Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0013] Task initiated on local node
[2026-06-03T21:45:07.492833Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.492924Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.493649Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.494072Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.497222Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0009] Task initiated on local node
[2026-06-03T21:45:07.498388Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0001] Task initiated on local node
[2026-06-03T21:45:07.526255Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.527017Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.529741Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-06-03T21:45:07.559067Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.559882Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.561749Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.562601Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-06-03T21:45:07.562714Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.565324Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0004] Task initiated on local node
[2026-06-03T21:45:07.594659Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.595352Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.598317Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-06-03T21:45:08.010958Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.011761Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.015057Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-06-03T21:45:08.076123Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.076876Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.079928Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-06-03T21:45:08.141197Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.141912Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.144686Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0007] Task initiated on local node
[2026-06-03T21:45:08.173994Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.174705Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.177600Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-06-03T21:45:08.288999Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.289108Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.289848Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.290186Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.293483Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-06-03T21:45:08.294609Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-06-03T21:45:08.322253Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.322949Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.325788Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0011] Task initiated on local node
[2026-06-03T21:45:08.838417Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.839072Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.841958Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0001] Task initiated on local node
[2026-06-03T21:45:08.854927Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.855578Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.858069Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-06-03T21:45:08.871306Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.871969Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.874580Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-06-03T21:45:08.887855Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.888495Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.891167Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0002] Task initiated on local node
[2026-06-03T21:45:09.002684Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.002780Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.003450Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.003977Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.006919Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0006] Task initiated on local node
[2026-06-03T21:45:09.008067Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0013] Task initiated on local node
[2026-06-03T21:45:09.035997Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.036084Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.036698Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.036952Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.040260Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-06-03T21:45:09.041892Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-06-03T21:45:09.045111Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.045705Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.048199Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-06-03T21:45:09.077722Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.078355Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.081427Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-06-03T21:45:09.142745Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.143419Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.146278Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-06-03T21:45:09.175620Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.176279Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.179364Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0004] Task initiated on local node
[2026-06-03T21:45:09.208458Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.209073Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.211986Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-06-03T21:45:09.373537Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.374212Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.377506Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-06-03T21:45:09.438641Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.439584Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.442849Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-06-03T21:45:09.503787Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.503882Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.504623Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.504951Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.508004Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-06-03T21:45:09.508780Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0002] Task initiated on local node
[2026-06-03T21:45:09.537819Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.537906Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.538542Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.538839Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.542201Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-06-03T21:45:09.543248Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-06-03T21:45:09.571174Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.571900Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.574634Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0012] Task initiated on local node
[2026-06-03T21:45:09.603886Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.619931Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.620592Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.623319Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-06-03T21:45:09.652651Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.668681Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.669274Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.671879Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-06-03T21:45:09.701214Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.865785Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.866318Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.869144Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0011] Task initiated on local node
[2026-06-03T21:45:09.898440Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.063050Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.063585Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.066548Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-06-03T21:45:10.095840Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.360772Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.361321Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.364313Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-06-03T21:45:10.393427Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.708351Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.708876Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.711453Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-06-03T21:45:10.740843Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.955497Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.956036Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.959038Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-06-03T21:45:10.988284Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.988604Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.988747Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.989095Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.989657Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.994423Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-03T21:45:10.995584Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-03T21:45:10.996778Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-03T21:45:11.021633Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.021698Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.021719Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.021920Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.023473Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.024135Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-03T21:45:11.026201Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-03T21:45:11.087566Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.087648Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.087878Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.091142Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-03T21:45:11.152192Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.474913Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-03T21:45:22.728880Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-03T21:45:22.728880Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] 
[2026-06-03T21:45:22.728880Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-03T21:45:22.728963Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] 
[2026-06-03T21:45:22.728970Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-03T21:45:22.728978Z] [nf-54feee377997101861535bd0307528ca-eb1d2-9d4f8] [586_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec