File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f1/914b144f9124deb91d9b5c089c9375/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-k3cqhe7j because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:48:14,309 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:48:15,103 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:48:15,276 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:48:16,197 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:48:16,274 - cnv_pipe.batch.run_model - INFO - Processing cluster 505 with 181 probes
2026-06-03 21:48:16,734 - cnv_pipe.batch.run_model.cluster505 - INFO - Child process started for cluster 505 with 181 probes
2026-06-03 21:49:10,073 - cnv_pipe.batch.run_model.cluster505 - INFO - Child process finished cluster 505. Wrote cluster_505_samples.csv and cluster_505_params.csv
2026-06-03 21:49:10,074 - cnv_pipe.batch.run_model - INFO - Cluster 505 finished in 53.80 seconds. Status: SUCCESS