File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c0/fe50108c89a224d7b1036dc37ce3ae/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-oy7_ycu5 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:50:14,164 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:50:14,988 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:50:15,165 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:50:16,137 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:50:16,218 - cnv_pipe.batch.run_model - INFO - Processing cluster 1159 with 185 probes
2026-06-03 21:50:16,694 - cnv_pipe.batch.run_model.cluster1159 - INFO - Child process started for cluster 1159 with 185 probes
2026-06-03 21:51:10,096 - cnv_pipe.batch.run_model.cluster1159 - INFO - Child process finished cluster 1159. Wrote cluster_1159_samples.csv and cluster_1159_params.csv
2026-06-03 21:51:10,097 - cnv_pipe.batch.run_model - INFO - Cluster 1159 finished in 53.88 seconds. Status: SUCCESS