cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i Sig_18_Blood.md.bam --algo AlignmentStat Sig_18_Blood.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo Sig_18_Blood.sentieon.insert_size_metrics --algo QualDistribution Sig_18_Blood.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle Sig_18_Blood.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle Sig_18_Blood.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
No more license available for sentieon:Metrics
No more license available for sentieon:Metrics
No more license available for sentieon:Metrics
No more license available for sentieon:Metrics
No more license available for sentieon:Metrics
No more license available for sentieon:Metrics
No more license available for sentieon:Metrics
No more license available for sentieon:Metrics
No more license available for sentieon:Metrics
No more license available for sentieon:Metrics
No more license available for sentieon:Metrics
No more license available for sentieon:Metrics
No more license available for sentieon:Metrics
No more license available for sentieon:Metrics
No more license available for sentieon:Metrics
No more license available for sentieon:Metrics
No more license available for sentieon:Metrics
progress 5% @chr1:163000001, elapsed 840.2s, est remaining 15963.1s, peak mem 81MB, user 0.1s, sys 0.7s, output queue size 9
progress 10% @chr2:73000001, elapsed 840.2s, est remaining 7561.8s, peak mem 81MB, user 0.2s, sys 1.6s, output queue size 2
progress 15% @chr2:234000001, elapsed 840.2s, est remaining 4761.3s, peak mem 81MB, user 0.3s, sys 2.4s, output queue size 2
progress 20% @chr3:153000001, elapsed 840.3s, est remaining 3361.0s, peak mem 81MB, user 0.4s, sys 3.3s, output queue size 1
progress 25% @chr4:114000001, elapsed 840.3s, est remaining 2520.9s, peak mem 81MB, user 0.5s, sys 4.2s, output queue size 11
progress 30% @chr5:88000001, elapsed 840.3s, est remaining 1960.7s, peak mem 81MB, user 0.7s, sys 4.8s, output queue size 4
progress 35% @chr6:64000001, elapsed 840.3s, est remaining 1560.6s, peak mem 81MB, user 0.8s, sys 5.7s, output queue size 1
progress 40% @chr7:54000001, elapsed 840.4s, est remaining 1260.6s, peak mem 81MB, user 0.9s, sys 6.5s, output queue size 1
progress 45% @chr8:60000001, elapsed 840.4s, est remaining 1027.2s, peak mem 81MB, user 1.0s, sys 7.2s, output queue size 14
progress 50% @chr9:69000001, elapsed 840.4s, est remaining 840.4s, peak mem 81MB, user 1.1s, sys 8.1s, output queue size 4
progress 55% @chr10:95000001, elapsed 840.5s, est remaining 687.7s, peak mem 81MB, user 1.2s, sys 8.8s, output queue size 6
progress 60% @chr11:122000001, elapsed 840.5s, est remaining 560.3s, peak mem 81MB, user 1.3s, sys 9.8s, output queue size 2
progress 65% @chr13:13000001, elapsed 840.5s, est remaining 452.6s, peak mem 81MB, user 1.4s, sys 10.6s, output queue size 2
progress 70% @chr14:62000001, elapsed 840.6s, est remaining 360.2s, peak mem 81MB, user 1.5s, sys 11.4s, output queue size 7
progress 75% @chr16:6000001, elapsed 840.6s, est remaining 280.2s, peak mem 81MB, user 1.6s, sys 12.2s, output queue size 17
progress 80% @chr17:80000001, elapsed 840.6s, est remaining 210.2s, peak mem 81MB, user 1.7s, sys 13.2s, output queue size 4
progress 85% @chr20:23000001, elapsed 840.7s, est remaining 148.4s, peak mem 81MB, user 1.8s, sys 14.0s, output queue size 4
progress 90% @chrX:43000001, elapsed 840.7s, est remaining 93.4s, peak mem 109MB, user 2.5s, sys 14.3s, output queue size 114
progress 95% @chrY:36000001, elapsed 840.8s, est remaining 44.3s, peak mem 127MB, user 3.6s, sys 14.8s, output queue size 276
progress 100% @chr21:41000001, elapsed 841.8s, est remaining 0.0s, peak mem 162MB, user 7.7s, sys 15.4s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 52290604
reads: 1001133
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.660 user 7.472 sys 9.937 real
done: 1 calls 0.000 user 0.000 sys 0.002 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.001 user 0.002 sys 841.830 real
idle: 61 calls 0.028 user 0.038 sys 59.149 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 170094592 mem 8.022 user 16.085 sys 842.872 real