[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXStou7t/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXStou7t/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXStou7t/chr6_138229684-138229952.bed.gz.tbi
[2026-06-03T21:44:55.558850Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-03T21:44:55.569792Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-03T21:44:55.569827Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-03T21:44:55.569833Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-03T21:44:55.569838Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXStou7t'
[2026-06-03T21:44:55.569842Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-03T21:44:55.569848Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-03T21:44:55.569852Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-03T21:44:55.569856Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-06-03T21:44:55.569859Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-03T21:44:55.569863Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-03T21:44:55.569866Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-03T21:44:55.569885Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-03T21:44:55.569894Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-03T21:44:55.570411Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-03T21:44:55.570535Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-03T21:44:55.576416Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-03T21:44:55.577079Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-03T21:44:55.577271Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-03T21:44:55.577519Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-03T21:44:55.577845Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.579150Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.579280Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.579357Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.579480Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.579549Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.579684Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.579892Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.580381Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.580520Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-03T21:44:55.580829Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.581416Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.583377Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.584051Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-03T21:44:55.584368Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.584639Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.584918Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.585195Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.585554Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.585754Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.586142Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.586470Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.586589Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.586659Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.586773Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.586836Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.586954Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.587020Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.587137Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.587205Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.587316Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.587387Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.587604Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.587949Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.588064Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.588130Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.588241Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.588306Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.588415Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.588482Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.588593Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.588657Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.588767Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.588830Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.588936Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.589046Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.589550Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.589669Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.589813Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.589897Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.590012Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.590078Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.590185Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.590248Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.590361Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.590422Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.590554Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.590890Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.591359Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.591428Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.591566Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.591627Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.591738Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.591804Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.591911Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.591978Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.592118Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.592183Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.592295Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.592492Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.593088Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.593162Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.593272Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.593336Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.594924Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.595113Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.595404Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.596058Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.596669Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.596737Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.596849Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.596913Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.597056Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.597119Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.597229Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.597299Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.597412Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.597483Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.597604Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.597764Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.598092Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.598786Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.599545Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.599616Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.599730Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.599792Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.599908Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.599972Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.600082Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.600147Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.600309Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.600375Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.600485Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.600562Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.600890Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.601600Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.601711Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.601773Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.601901Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.601970Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.604833Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.605499Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.605778Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.605845Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.620815Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.621449Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:55.621613Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.622606Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.622669Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:44:55.623289Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:44:55.623638Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.623993Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.624233Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:44:55.625120Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.625328Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:44:55.626014Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:44:55.626492Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.627044Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:44:55.628239Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:44:55.629147Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.629500Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:44:55.630409Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-03T21:44:55.631655Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-03T21:44:55.637336Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-06-03T21:44:55.638584Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-06-03T21:44:55.642905Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-06-03T21:44:55.645728Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-06-03T21:44:55.646608Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-06-03T21:44:55.651553Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-06-03T21:44:55.652896Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-06-03T21:44:55.653152Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-06-03T21:44:55.767288Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:55.767378Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:55.768586Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:44:55.768897Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:44:55.773437Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-06-03T21:44:55.835403Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-06-03T21:44:55.884431Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:55.885644Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:44:55.888978Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-06-03T21:44:56.451173Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:56.452419Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:44:56.455484Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-06-03T21:44:56.484372Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:56.484447Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:56.485541Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-03T21:44:56.486017Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-03T21:44:56.489665Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-06-03T21:44:56.490149Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-06-03T21:44:56.518425Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:56.519524Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:44:56.522175Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-06-03T21:44:56.583552Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:56.584738Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:44:56.587869Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-06-03T21:44:56.699540Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:56.700708Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:44:56.704102Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-06-03T21:44:56.765472Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:56.766687Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:44:56.769896Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-06-03T21:44:56.831035Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:56.831132Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:56.832461Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:44:56.832789Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:44:56.836309Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-06-03T21:44:56.837256Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-06-03T21:44:56.898863Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:56.898943Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:56.898974Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:56.899955Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:44:56.900432Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:44:56.900921Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:44:56.905052Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-06-03T21:44:56.906211Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-06-03T21:44:57.066968Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:57.068533Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:44:57.071744Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-06-03T21:44:57.533465Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:57.534540Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:44:57.537590Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-06-03T21:44:57.566483Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:57.566562Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:57.567581Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:44:57.567848Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:44:57.571171Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-06-03T21:44:57.782730Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:57.783994Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:44:57.787534Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-06-03T21:44:57.955147Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-06-03T21:44:57.999484Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.000642Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.004184Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-06-03T21:44:58.065087Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.066404Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.069725Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-06-03T21:44:58.130521Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.130621Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.131643Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.131969Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.135523Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-06-03T21:44:58.136567Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-06-03T21:44:58.166251Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.167273Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.170176Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-06-03T21:44:58.183055Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.184036Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.186953Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-06-03T21:44:58.248173Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.248250Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.249212Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.249698Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.252659Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-06-03T21:44:58.254107Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-06-03T21:44:58.283400Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.283478Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.284782Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.285027Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.285496Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.287930Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-06-03T21:44:58.290024Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-06-03T21:44:58.290154Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.292998Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-06-03T21:44:58.322199Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.323227Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.326109Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-06-03T21:44:58.355233Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.356181Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.359127Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-06-03T21:44:58.388199Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.389088Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.391772Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-06-03T21:44:58.453193Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.454232Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.457336Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-06-03T21:44:58.486435Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.487430Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.490145Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-06-03T21:44:58.519482Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.520759Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.524070Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-06-03T21:44:58.553031Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.554001Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.557070Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-06-03T21:44:59.019227Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.020277Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.023320Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-06-03T21:44:59.045636Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-06-03T21:44:59.052302Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.052394Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.052430Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.053599Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.054008Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.054214Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.059126Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-06-03T21:44:59.059378Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-06-03T21:44:59.060393Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-06-03T21:44:59.087314Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.088705Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.089001Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.091645Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.092348Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-06-03T21:44:59.094719Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-06-03T21:44:59.124004Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.124083Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.124107Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.124957Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.125209Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.125636Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.128592Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-06-03T21:44:59.131157Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-06-03T21:44:59.132389Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-06-03T21:44:59.158192Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.158277Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.159120Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.159439Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.162343Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-06-03T21:44:59.163612Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-06-03T21:44:59.175365Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.176181Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.179467Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-06-03T21:44:59.184413Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.185239Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.188133Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-06-03T21:44:59.188959Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.189741Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.192367Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-06-03T21:44:59.221706Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.221809Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.222637Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.222976Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.225334Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.226372Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-06-03T21:44:59.228647Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-06-03T21:44:59.228779Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.231285Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-06-03T21:44:59.260638Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.260739Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.261521Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.261784Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.265231Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-06-03T21:44:59.266110Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-03T21:44:59.326415Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.327304Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.330524Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-06-03T21:44:59.343142Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.343925Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.346779Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-06-03T21:44:59.359774Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.360560Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.363393Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-06-03T21:44:59.392637Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.393520Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.396186Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-06-03T21:44:59.425552Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.426432Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.429087Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-06-03T21:44:59.490586Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.491464Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.495051Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-06-03T21:44:59.523625Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.524461Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.527514Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-06-03T21:44:59.556584Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.557422Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.560334Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-06-03T21:44:59.621552Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.622431Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.625284Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-03T21:44:59.686662Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.687525Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.690668Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-06-03T21:44:59.752070Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.752159Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.753020Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.753424Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.756551Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-06-03T21:44:59.757288Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-06-03T21:44:59.785547Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.785634Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.786393Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.786790Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.790278Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-06-03T21:44:59.791005Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-06-03T21:44:59.819332Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.820107Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.823094Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-06-03T21:44:59.852221Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.853037Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.856077Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-06-03T21:45:00.368825Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.369695Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.373138Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-06-03T21:45:00.434199Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.435003Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.437907Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-06-03T21:45:00.467098Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.467884Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.470861Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-06-03T21:45:00.582091Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.582853Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.586272Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-06-03T21:45:00.647278Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.648053Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.650971Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-06-03T21:45:00.680111Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.680865Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.684029Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-06-03T21:45:00.713014Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.713745Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.717007Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-06-03T21:45:00.745794Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.746546Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.749386Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-06-03T21:45:00.810685Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.811460Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.815072Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-06-03T21:45:00.827517Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.828186Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.831403Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-06-03T21:45:00.892470Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.892574Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.893345Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.893622Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.896789Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-06-03T21:45:00.898201Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-06-03T21:45:00.925867Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.926575Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.929686Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-06-03T21:45:00.990793Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.991539Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.994513Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-06-03T21:45:01.007577Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.008225Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.010711Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-06-03T21:45:01.040111Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.040198Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.040840Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.041153Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.044105Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-06-03T21:45:01.045004Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.045705Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.045932Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-06-03T21:45:01.048858Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-06-03T21:45:01.077848Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.077934Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.077967Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.078602Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.078883Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.080606Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.081205Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-06-03T21:45:01.083891Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-06-03T21:45:01.084943Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-06-03T21:45:01.113239Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.113310Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.113345Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.113369Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.113951Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.114511Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.114789Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.115262Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.118730Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-06-03T21:45:01.119753Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-06-03T21:45:01.122268Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-06-03T21:45:01.122876Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-03T21:45:01.147867Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.147933Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.148465Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.150888Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-06-03T21:45:01.180233Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.212243Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.212745Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.215641Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-03T21:45:01.245128Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.309342Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.309882Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.312493Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-06-03T21:45:01.341738Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.107682Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.108318Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.111184Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-06-03T21:45:02.140286Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.254602Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.255230Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.257930Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-06-03T21:45:02.287307Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.401551Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.402367Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.405079Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-06-03T21:45:02.434413Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.699212Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.699783Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.702774Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-06-03T21:45:02.763914Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.764280Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.764435Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.764728Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.765340Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.769451Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-03T21:45:02.770637Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-03T21:45:02.771747Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-03T21:45:02.797366Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.797434Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.797459Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.797690Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.797996Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.800500Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-03T21:45:02.801467Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-03T21:45:02.830040Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.830104Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.830352Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.833461Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-03T21:45:02.862365Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.185279Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-03T21:45:14.458202Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-03T21:45:14.458202Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] 
[2026-06-03T21:45:14.458202Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-03T21:45:14.458284Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] 
[2026-06-03T21:45:14.458292Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-03T21:45:14.458299Z] [nf-2493610911d8f851217e99b6c9c04f56-88fa9-vq5hj] [591_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec