mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-3ii84r4i because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:48:28,389 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:48:29,170 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:48:29,337 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:48:30,236 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:48:30,410 - cnv_pipe.batch.run_model - INFO - Processing cluster 588 with 196 probes
2026-06-03 21:48:30,777 - cnv_pipe.batch.run_model.cluster588 - INFO - Child process started for cluster 588 with 196 probes
2026-06-03 21:49:29,481 - cnv_pipe.batch.run_model.cluster588 - INFO - Child process finished cluster 588. Wrote cluster_588_samples.csv and cluster_588_params.csv
2026-06-03 21:49:29,481 - cnv_pipe.batch.run_model - INFO - Cluster 588 finished in 59.07 seconds. Status: SUCCESS