mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-0koo5pun because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:46:52,224 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:46:53,013 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:46:53,181 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:46:54,099 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:46:54,254 - cnv_pipe.batch.run_model - INFO - Processing cluster 46 with 192 probes
2026-06-03 21:46:54,637 - cnv_pipe.batch.run_model.cluster46 - INFO - Child process started for cluster 46 with 192 probes
2026-06-03 21:47:50,271 - cnv_pipe.batch.run_model.cluster46 - INFO - Child process finished cluster 46. Wrote cluster_46_samples.csv and cluster_46_params.csv
2026-06-03 21:47:50,272 - cnv_pipe.batch.run_model - INFO - Cluster 46 finished in 56.02 seconds. Status: SUCCESS