File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f3/f8c708a1ab2b5b929d2f810fc4fedf/.command.log
Size
87.4 KB
Task
DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (negative_somatic_control_2;chr4_22420786-22421189.bed)
Attempt

Content

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  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr4_22420786-22421189.bed.gz.tbi
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f3/f8c708a1ab2b5b929d2f810fc4fedf/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr4_22420786-22421189.bed.gz
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f3/f8c708a1ab2b5b929d2f810fc4fedf/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f1/55e68b26048fb02e6d377a2b8f5bd1/Sig_18_Blood.recalibrated.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f1/55e68b26048fb02e6d377a2b8f5bd1/Sig_18_Blood.recalibrated.bam
==> STAGING COMPLETE (10 inputs)


Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[2026-06-03T21:45:03.680672Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-03T21:45:03.681653Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-03T21:45:03.681673Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-03T21:45:03.681679Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-03T21:45:03.681685Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXeDlKDx'
[2026-06-03T21:45:03.681691Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-03T21:45:03.681698Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-03T21:45:03.681703Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-03T21:45:03.681708Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] [RunParameters] memMb: 1015785
[2026-06-03T21:45:03.681713Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-03T21:45:03.681719Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-03T21:45:03.681724Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-03T21:45:03.681729Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-03T21:45:03.681734Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-03T21:45:03.682249Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-03T21:45:03.682367Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-03T21:45:03.690266Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-03T21:45:03.691002Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-03T21:45:03.691208Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-03T21:45:03.691623Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-03T21:45:03.691873Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.692464Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.692582Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.692678Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.692835Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.692941Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.693249Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.693637Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.693935Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.694011Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.694513Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.695164Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.695322Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.695546Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.697194Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.697611Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-03T21:45:03.698136Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.698259Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.698439Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.698532Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.698772Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.699040Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.699515Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.699611Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.699762Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.699848Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.700003Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.700091Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.700240Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.700330Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.700603Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.701062Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.701232Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.701318Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.701475Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.701563Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.701712Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.701801Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.701950Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.702077Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.702602Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.703057Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.703225Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.703314Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.703462Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.703549Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.703702Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.703790Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.704111Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.704781Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.704941Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.705030Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.705179Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.705264Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.705412Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.705497Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.705646Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.705765Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.706171Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.706837Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.707000Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.707085Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.707237Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.707341Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.707488Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.707580Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.707757Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.707951Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.708844Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.708936Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.709088Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.709178Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.709325Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.709414Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.711504Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.712352Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.712534Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.712647Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.712806Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.712896Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.713049Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.713133Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.713313Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.713508Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.714492Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.714605Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.714758Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.714858Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.715010Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.715097Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.715347Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.715463Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.715777Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.716112Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.717161Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.718124Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.737407Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.737536Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.737637Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.737905Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.738000Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.738214Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.738313Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.738488Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.738583Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-03T21:45:03.738651Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-03T21:45:03.752888Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.753997Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.754291Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.754933Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.755365Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.755802Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.756402Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.757091Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.757873Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.762159Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0013] Task initiated on local node
[2026-06-03T21:45:03.763159Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-06-03T21:45:03.768700Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-06-03T21:45:03.769421Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-06-03T21:45:03.770748Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-06-03T21:45:03.771710Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-06-03T21:45:03.773801Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0002] Task initiated on local node
[2026-06-03T21:45:03.774789Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-06-03T21:45:03.877630Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.879176Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.883054Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-06-03T21:45:04.595597Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.596930Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.600644Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0008] Task initiated on local node
[2026-06-03T21:45:04.662009Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.663360Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.666970Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-06-03T21:45:05.078660Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.079952Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.083274Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-06-03T21:45:05.144410Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.144511Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.145734Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.146273Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.149060Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_003_chr4_0000] Task initiated on local node
[2026-06-03T21:45:05.151269Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-06-03T21:45:05.212795Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.214124Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.217557Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0000] Task initiated on local node
[2026-06-03T21:45:05.479262Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.480564Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.484437Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0015] Task initiated on local node
[2026-06-03T21:45:05.545182Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.546495Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.549543Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-06-03T21:45:05.610819Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.612101Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.615467Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0005] Task initiated on local node
[2026-06-03T21:45:05.826855Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.828140Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.831382Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-06-03T21:45:05.893016Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.894356Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.897366Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0008] Task initiated on local node
[2026-06-03T21:45:05.958952Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.960213Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.963571Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-06-03T21:45:06.125530Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.126815Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.130073Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-06-03T21:45:06.159432Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.160628Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.163861Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-06-03T21:45:06.164433Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.165517Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.168343Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-06-03T21:45:06.731157Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.732353Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.735576Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0000] Task initiated on local node
[2026-06-03T21:45:06.796715Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.798060Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.801464Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0010] Task initiated on local node
[2026-06-03T21:45:06.862711Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.863957Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.867432Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-06-03T21:45:06.928376Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.929618Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.933221Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-06-03T21:45:07.044384Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.045612Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.049165Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-06-03T21:45:07.110141Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.111364Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.114906Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-06-03T21:45:07.226242Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.227426Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.230916Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-06-03T21:45:07.291914Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.293093Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.296434Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-06-03T21:45:07.309227Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.310350Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.313539Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0005] Task initiated on local node
[2026-06-03T21:45:07.374804Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.376651Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.379857Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-06-03T21:45:07.440979Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.442801Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.445770Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0013] Task initiated on local node
[2026-06-03T21:45:07.507060Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.508880Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.512195Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-06-03T21:45:07.673686Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.675549Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.679066Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-06-03T21:45:08.040609Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.042477Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.045905Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-06-03T21:45:08.074777Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.076525Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.079766Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0010] Task initiated on local node
[2026-06-03T21:45:08.108760Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.110473Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.113485Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-06-03T21:45:08.114261Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.115896Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.119148Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-06-03T21:45:08.148128Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.149829Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.153175Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0012] Task initiated on local node
[2026-06-03T21:45:08.364807Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.365907Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.369012Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0007] Task initiated on local node
[2026-06-03T21:45:08.398484Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.399539Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.402442Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-06-03T21:45:08.463949Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.465051Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.468609Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-06-03T21:45:08.881500Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.883086Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.886423Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-06-03T21:45:08.947530Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.949405Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.952792Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-06-03T21:45:09.264376Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.265434Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.268575Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-06-03T21:45:09.329729Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.330778Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.333764Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-06-03T21:45:09.395075Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.395186Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.396097Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.396692Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.400143Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-06-03T21:45:09.401350Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0006] Task initiated on local node
[2026-06-03T21:45:09.461043Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.462054Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.465640Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-06-03T21:45:09.978143Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.978231Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.979154Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.979820Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.982004Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.983627Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-06-03T21:45:09.984963Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-06-03T21:45:09.985081Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.988022Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-06-03T21:45:10.017276Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.017343Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.018219Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.020428Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.020954Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.021169Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-06-03T21:45:10.022769Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.025823Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-06-03T21:45:10.026949Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-06-03T21:45:10.088186Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.088304Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.089234Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.089834Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.092876Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-06-03T21:45:10.094334Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0007] Task initiated on local node
[2026-06-03T21:45:10.155663Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.155766Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.156651Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.157290Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.160915Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-06-03T21:45:10.161950Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-06-03T21:45:10.372734Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.373682Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.377394Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0001] Task initiated on local node
[2026-06-03T21:45:10.688925Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.689835Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.693452Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-06-03T21:45:10.904843Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.905740Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.909261Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0015] Task initiated on local node
[2026-06-03T21:45:10.970192Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.970286Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.971113Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.971558Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.975437Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0004] Task initiated on local node
[2026-06-03T21:45:10.976335Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0014] Task initiated on local node
[2026-06-03T21:45:11.238822Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.239675Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.242821Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-06-03T21:45:11.303973Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.304874Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.308737Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0011] Task initiated on local node
[2026-06-03T21:45:11.369462Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.370354Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.373680Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-06-03T21:45:11.434763Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.435599Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.438852Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0001] Task initiated on local node
[2026-06-03T21:45:11.500032Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.500868Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.504793Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-06-03T21:45:11.615751Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.616608Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.620387Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-06-03T21:45:11.681313Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.682134Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.685763Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-06-03T21:45:11.746595Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.747438Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.751400Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0009] Task initiated on local node
[2026-06-03T21:45:11.862180Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.862988Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.866720Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0006] Task initiated on local node
[2026-06-03T21:45:11.927385Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.928230Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.931362Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-06-03T21:45:11.992562Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.993422Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.997008Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-06-03T21:45:12.108089Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.108899Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.112121Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0004] Task initiated on local node
[2026-06-03T21:45:12.173131Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.173921Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.177342Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-06-03T21:45:12.338839Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.339570Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.342850Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-06-03T21:45:12.348634Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.349344Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.352427Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0014] Task initiated on local node
[2026-06-03T21:45:12.381577Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.382308Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.385401Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0012] Task initiated on local node
[2026-06-03T21:45:12.386085Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.386721Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.389816Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-06-03T21:45:12.450975Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.451720Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.454844Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-06-03T21:45:12.516037Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.516756Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.520119Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0003] Task initiated on local node
[2026-06-03T21:45:12.581545Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.582275Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.585397Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-06-03T21:45:12.646246Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.646350Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.646994Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.647311Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.650222Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0002] Task initiated on local node
[2026-06-03T21:45:12.651564Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-06-03T21:45:12.711556Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.711662Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:13.226956Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:13.227592Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:13.230929Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-06-03T21:45:13.292026Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:13.292137Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:13.292753Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:13.296011Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0009] Task initiated on local node
[2026-06-03T21:45:13.357499Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:13.572097Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:13.572684Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:13.575865Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-06-03T21:45:13.636998Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:13.801485Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:13.802122Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:13.805356Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0011] Task initiated on local node
[2026-06-03T21:45:13.866313Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.130893Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.131456Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.134719Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-06-03T21:45:14.195528Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.510074Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.510685Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.513495Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0003] Task initiated on local node
[2026-06-03T21:45:14.574703Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.575073Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.575233Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.575805Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.576612Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.580067Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-03T21:45:14.581707Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-03T21:45:14.582789Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-03T21:45:14.642332Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.642406Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.642438Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.642695Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.642995Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.646108Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-03T21:45:14.647062Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-03T21:45:14.675009Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.678435Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.678655Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.681309Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-03T21:45:14.742864Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:22.662950Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-03T21:45:36.800831Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-03T21:45:36.800831Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] 
[2026-06-03T21:45:36.800831Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-03T21:45:36.800912Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] 
[2026-06-03T21:45:36.800921Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-03T21:45:36.800929Z] [nf-f3f8c708a1ab2b5b929d2f810fc4fedf-ae654-q4sgg] [562_1] [WorkflowRunner] Elapsed time for full workflow: 33 sec