File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5f/1e2edfc717039371c060e59b77ddd3/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-21fgn5q5 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:50:41,029 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:50:41,873 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:50:42,051 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:50:43,040 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:50:43,209 - cnv_pipe.batch.run_model - INFO - Processing cluster 1290 with 196 probes
2026-06-03 21:50:43,590 - cnv_pipe.batch.run_model.cluster1290 - INFO - Child process started for cluster 1290 with 196 probes
2026-06-03 21:51:41,570 - cnv_pipe.batch.run_model.cluster1290 - INFO - Child process finished cluster 1290. Wrote cluster_1290_samples.csv and cluster_1290_params.csv
2026-06-03 21:51:41,571 - cnv_pipe.batch.run_model - INFO - Cluster 1290 finished in 58.36 seconds. Status: SUCCESS