cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_BL.md.bam --algo HsMetricAlgo --targets_list targets/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity_footprint.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_BL_xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity_footprint.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
No more license available for sentieon:Metrics
No more license available for sentieon:Metrics
No more license available for sentieon:Metrics
No more license available for sentieon:Metrics
No more license available for sentieon:Metrics
No more license available for sentieon:Metrics
No more license available for sentieon:Metrics
progress 5% @chr1:174000001, elapsed 180.1s, est remaining 3422.3s, peak mem 114MB, user 0.1s, sys 2.2s, output queue size 13
progress 10% @chr2:60000001, elapsed 180.2s, est remaining 1621.9s, peak mem 114MB, user 0.3s, sys 4.7s, output queue size 13
progress 15% @chr2:220000001, elapsed 180.3s, est remaining 1021.7s, peak mem 114MB, user 0.3s, sys 7.1s, output queue size 15
progress 20% @chr3:136000001, elapsed 180.4s, est remaining 721.5s, peak mem 114MB, user 0.4s, sys 9.6s, output queue size 17
progress 25% @chr4:103000001, elapsed 180.5s, est remaining 541.4s, peak mem 114MB, user 0.5s, sys 12.0s, output queue size 55
progress 30% @chr5:111000001, elapsed 180.5s, est remaining 421.2s, peak mem 114MB, user 0.6s, sys 14.3s, output queue size 43
progress 35% @chr6:56000001, elapsed 180.6s, est remaining 335.4s, peak mem 114MB, user 0.8s, sys 16.6s, output queue size 33
progress 40% @chr7:80000001, elapsed 180.7s, est remaining 271.0s, peak mem 114MB, user 0.9s, sys 19.0s, output queue size 17
progress 45% @chr8:80000001, elapsed 180.8s, est remaining 220.9s, peak mem 114MB, user 1.0s, sys 21.3s, output queue size 17
progress 50% @chr9:49000001, elapsed 180.9s, est remaining 180.9s, peak mem 114MB, user 1.1s, sys 23.7s, output queue size 24
progress 55% @chr10:84000001, elapsed 180.9s, est remaining 148.0s, peak mem 114MB, user 1.2s, sys 26.0s, output queue size 54
progress 60% @chr11:108000001, elapsed 181.0s, est remaining 120.7s, peak mem 114MB, user 1.3s, sys 28.3s, output queue size 15
progress 65% @chr13:13000001, elapsed 181.1s, est remaining 97.5s, peak mem 114MB, user 1.4s, sys 30.5s, output queue size 13
progress 70% @chr14:55000001, elapsed 181.2s, est remaining 77.6s, peak mem 114MB, user 1.5s, sys 32.8s, output queue size 40
progress 75% @chr16:5000001, elapsed 181.2s, est remaining 60.4s, peak mem 114MB, user 1.6s, sys 35.1s, output queue size 17
progress 80% @chr18:20000001, elapsed 181.3s, est remaining 45.3s, peak mem 114MB, user 1.7s, sys 37.4s, output queue size 21
progress 85% @chr20:13000001, elapsed 181.4s, est remaining 32.0s, peak mem 114MB, user 1.8s, sys 39.7s, output queue size 10
progress 90% @chrX:28000001, elapsed 181.5s, est remaining 20.2s, peak mem 126MB, user 2.5s, sys 41.3s, output queue size 114
progress 95% @chrY:47000001, elapsed 181.6s, est remaining 9.6s, peak mem 147MB, user 3.2s, sys 43.2s, output queue size 276
progress 100% @chr21:41000001, elapsed 182.2s, est remaining 0.0s, peak mem 168MB, user 4.5s, sys 46.5s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 384
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 51395352
reads: 1001089
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.333 user 23.773 sys 25.388 real
done: 1 calls 0.015 user 0.000 sys 0.021 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.005 user 0.002 sys 182.209 real
idle: 61 calls 0.003 user 0.015 sys 46.028 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 176214016 mem 5.056 user 47.294 sys 183.788 real