File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b0/b2ad738107260cd9b2daf6a27ea545/.command.err
Size
53.7 KB
Task
DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (positive_somatic_control_2;chr16_25246607-25247490.bed)
Attempt

Content

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[2026-06-03T21:44:58.129971Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-03T21:44:58.132623Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-03T21:44:58.132636Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-03T21:44:58.132641Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-03T21:44:58.132645Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXmXZbBJ'
[2026-06-03T21:44:58.132649Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-03T21:44:58.132654Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-03T21:44:58.132658Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-03T21:44:58.132662Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-06-03T21:44:58.132667Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-03T21:44:58.132671Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-03T21:44:58.132676Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-03T21:44:58.132680Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-03T21:44:58.132684Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-03T21:44:58.133411Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-03T21:44:58.133472Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-03T21:44:58.139217Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-03T21:44:58.139967Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-03T21:44:58.140170Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-03T21:44:58.140324Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-03T21:44:58.140598Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.141616Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.141780Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.142038Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.142142Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.142341Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.142458Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.143028Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.143345Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.144799Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.145268Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.145561Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-03T21:44:58.145836Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.145911Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.146034Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.146103Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.146222Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.146287Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.146405Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.146471Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.146652Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.146730Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.146971Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.147212Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.147352Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.147421Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.147539Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.147607Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.147719Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.147785Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.147898Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.147985Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.148105Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.148170Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.148447Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.148705Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.148818Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.148884Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.148998Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.149062Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.149202Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.149270Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.149385Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.149454Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.149615Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.149695Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.149936Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.150287Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.150460Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.150525Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.150633Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.150699Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.150807Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.150867Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.150974Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.151038Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.165950Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.166289Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.166356Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.166503Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.166573Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.166660Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.166725Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.166830Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.166899Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-03T21:44:58.166948Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-03T21:44:58.171141Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.171770Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.172012Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.172351Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.172718Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.173095Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.173981Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.175849Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.177121Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.181858Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0004] Task initiated on local node
[2026-06-03T21:44:58.185130Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-06-03T21:44:58.194527Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0004] Task initiated on local node
[2026-06-03T21:44:58.196504Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0006] Task initiated on local node
[2026-06-03T21:44:58.197795Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-06-03T21:44:58.199301Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-06-03T21:44:58.200892Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-06-03T21:44:58.263853Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0003] Task initiated on local node
[2026-06-03T21:44:58.293638Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.293700Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.294259Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.294519Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:44:58.298662Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0000] Task initiated on local node
[2026-06-03T21:44:58.299193Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0006] Task initiated on local node
[2026-06-03T21:44:59.062267Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.063026Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.066174Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-06-03T21:44:59.095171Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.095879Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.099135Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-06-03T21:44:59.127980Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.128753Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.131533Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-06-03T21:44:59.136378Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.137019Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.139396Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0003] Task initiated on local node
[2026-06-03T21:44:59.168679Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.169280Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.172191Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0001] Task initiated on local node
[2026-06-03T21:44:59.233555Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.234192Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.237333Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-06-03T21:44:59.266292Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.266996Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.269888Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0001] Task initiated on local node
[2026-06-03T21:44:59.581709Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.582386Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.585345Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0004] Task initiated on local node
[2026-06-03T21:44:59.614314Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.614946Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.617853Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0000] Task initiated on local node
[2026-06-03T21:44:59.829381Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.829975Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.832709Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-06-03T21:44:59.861886Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.862538Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.865365Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0004] Task initiated on local node
[2026-06-03T21:44:59.976804Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.976892Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.977489Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.977806Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:44:59.981306Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0003] Task initiated on local node
[2026-06-03T21:44:59.982629Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-06-03T21:45:00.010018Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.010616Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.013436Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-06-03T21:45:00.042524Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.043121Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.045796Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0002] Task initiated on local node
[2026-06-03T21:45:00.357736Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.358389Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.361055Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0006] Task initiated on local node
[2026-06-03T21:45:00.390345Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.390908Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.393533Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0001] Task initiated on local node
[2026-06-03T21:45:00.655524Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.656131Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.658896Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-06-03T21:45:00.720324Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.720410Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.720937Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.721228Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.725265Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.725583Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0001] Task initiated on local node
[2026-06-03T21:45:00.725766Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_015_chr16_0000] Task initiated on local node
[2026-06-03T21:45:00.726281Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.728548Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0003] Task initiated on local node
[2026-06-03T21:45:00.758055Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.758529Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.760847Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0004] Task initiated on local node
[2026-06-03T21:45:00.774244Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.774731Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.777155Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0000] Task initiated on local node
[2026-06-03T21:45:00.778203Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.778599Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.781244Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0003] Task initiated on local node
[2026-06-03T21:45:00.794301Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.794775Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.797331Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0002] Task initiated on local node
[2026-06-03T21:45:00.810871Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.811412Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.814554Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0005] Task initiated on local node
[2026-06-03T21:45:00.925673Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.926162Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.928867Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0000] Task initiated on local node
[2026-06-03T21:45:00.958050Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.958533Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.961126Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0000] Task initiated on local node
[2026-06-03T21:45:00.990445Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.990896Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.993629Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-06-03T21:45:01.205492Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.206030Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.208796Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0002] Task initiated on local node
[2026-06-03T21:45:01.238064Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.238523Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.241162Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0002] Task initiated on local node
[2026-06-03T21:45:01.246261Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.246705Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.249218Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0004] Task initiated on local node
[2026-06-03T21:45:01.262683Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.263107Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.266537Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0002] Task initiated on local node
[2026-06-03T21:45:01.278979Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.279047Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.279459Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.279731Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.282212Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0001] Task initiated on local node
[2026-06-03T21:45:01.283157Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-06-03T21:45:01.312836Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.312902Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.313277Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.313730Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.316586Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0006] Task initiated on local node
[2026-06-03T21:45:01.317626Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0003] Task initiated on local node
[2026-06-03T21:45:01.318065Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.318413Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.320748Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0001] Task initiated on local node
[2026-06-03T21:45:01.350180Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.350249Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.350279Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.350628Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.353456Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0005] Task initiated on local node
[2026-06-03T21:45:01.414815Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.415199Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.417587Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-06-03T21:45:01.447000Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.711489Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.711862Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.714968Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0005] Task initiated on local node
[2026-06-03T21:45:01.743965Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.908192Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.908552Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.911201Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-06-03T21:45:01.972602Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.136800Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.137179Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.140061Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0002] Task initiated on local node
[2026-06-03T21:45:02.201311Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.016978Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.017340Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.019609Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0005] Task initiated on local node
[2026-06-03T21:45:03.049097Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.052555Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.052854Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.054992Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0000] Task initiated on local node
[2026-06-03T21:45:03.084650Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.084863Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.084980Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.085260Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.085575Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.088520Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-03T21:45:03.089630Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-03T21:45:03.090519Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-03T21:45:03.118151Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.118210Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.118231Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.118416Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.118736Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.121061Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-03T21:45:03.121976Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-03T21:45:03.150517Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.150585Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.150746Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.153040Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-03T21:45:03.182550Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.798422Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-03T21:45:08.674430Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-03T21:45:08.674430Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] 
[2026-06-03T21:45:08.674430Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-03T21:45:08.674474Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] 
[2026-06-03T21:45:08.674480Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-03T21:45:08.674487Z] [nf-b0b2ad738107260cd9b2daf6a27ea545-491c1-6lkv2] [578_1] [WorkflowRunner] Elapsed time for full workflow: 10 sec