mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-4oj3wtpt because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:46:52,676 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:46:53,470 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:46:53,638 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:46:54,560 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:46:54,711 - cnv_pipe.batch.run_model - INFO - Processing cluster 48 with 197 probes
2026-06-03 21:46:55,083 - cnv_pipe.batch.run_model.cluster48 - INFO - Child process started for cluster 48 with 197 probes
2026-06-03 21:47:51,228 - cnv_pipe.batch.run_model.cluster48 - INFO - Child process finished cluster 48. Wrote cluster_48_samples.csv and cluster_48_params.csv
2026-06-03 21:47:51,229 - cnv_pipe.batch.run_model - INFO - Cluster 48 finished in 56.52 seconds. Status: SUCCESS