File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fe/e67d044213f925966039102c8f2172/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-yoeq7jvu because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:49:53,008 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:49:53,967 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:49:54,167 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:49:55,250 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:49:55,406 - cnv_pipe.batch.run_model - INFO - Processing cluster 1027 with 165 probes
2026-06-03 21:49:55,857 - cnv_pipe.batch.run_model.cluster1027 - INFO - Child process started for cluster 1027 with 165 probes
2026-06-03 21:50:53,721 - cnv_pipe.batch.run_model.cluster1027 - INFO - Child process finished cluster 1027. Wrote cluster_1027_samples.csv and cluster_1027_params.csv
2026-06-03 21:50:53,722 - cnv_pipe.batch.run_model - INFO - Cluster 1027 finished in 58.32 seconds. Status: SUCCESS