mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-qhvkyzhi because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:47:06,044 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:47:07,035 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:47:07,237 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:47:08,398 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:47:08,568 - cnv_pipe.batch.run_model - INFO - Processing cluster 113 with 189 probes
2026-06-03 21:47:09,065 - cnv_pipe.batch.run_model.cluster113 - INFO - Child process started for cluster 113 with 189 probes
2026-06-03 21:48:14,653 - cnv_pipe.batch.run_model.cluster113 - INFO - Child process finished cluster 113. Wrote cluster_113_samples.csv and cluster_113_params.csv
2026-06-03 21:48:14,654 - cnv_pipe.batch.run_model - INFO - Cluster 113 finished in 66.09 seconds. Status: SUCCESS