.command.log - Workdir - DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:VCF_SOMATIC_SNV_INDEL:TMB_SNV_INDEL (positive_somatic_control_1)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d3/f62d25f9ddcc8f2d9c8940c77c895a/.command.log
Size: 805 bytes
Task: DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:VCF_SOMATIC_SNV_INDEL:TMB_SNV_INDEL (positive_somatic_control_1)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d3/f62d25f9ddcc8f2d9c8940c77c895a/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d3/f62d25f9ddcc8f2d9c8940c77c895a/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/beds/altera_subpanels/hg38/xgen-exome-hyb-panel-v2-targets-hg38_short.mrg.bed
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/28/7589479cd7168f1f1632eb7fbb3818/positive_somatic_control_1.snv_indel.filtered.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/28/7589479cd7168f1f1632eb7fbb3818/positive_somatic_control_1.snv_indel.filtered.vcf.gz.tbi
==> STAGING COMPLETE (5 inputs)

TMB region size: 34149606 bp (34.15 MB)
Total: 173, In BED: 55, PASS: 0, TMB_VARIANT: 0, Score: 0.0