File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/93/c62a7c70b4020348c5e7b015fa9407/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-pc235oz_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:49:17,744 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:49:18,549 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:49:18,720 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:49:19,737 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:49:19,806 - cnv_pipe.batch.run_model - INFO - Processing cluster 849 with 186 probes
2026-06-03 21:49:20,184 - cnv_pipe.batch.run_model.cluster849 - INFO - Child process started for cluster 849 with 186 probes
2026-06-03 21:50:13,357 - cnv_pipe.batch.run_model.cluster849 - INFO - Child process finished cluster 849. Wrote cluster_849_samples.csv and cluster_849_params.csv
2026-06-03 21:50:13,358 - cnv_pipe.batch.run_model - INFO - Cluster 849 finished in 53.55 seconds. Status: SUCCESS