mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-p9zkkwf5 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:47:52,152 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:47:52,948 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:47:53,133 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:47:54,160 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:47:54,379 - cnv_pipe.batch.run_model - INFO - Processing cluster 380 with 168 probes
2026-06-03 21:47:54,749 - cnv_pipe.batch.run_model.cluster380 - INFO - Child process started for cluster 380 with 168 probes
2026-06-03 21:48:44,908 - cnv_pipe.batch.run_model.cluster380 - INFO - Child process finished cluster 380. Wrote cluster_380_samples.csv and cluster_380_params.csv
2026-06-03 21:48:44,909 - cnv_pipe.batch.run_model - INFO - Cluster 380 finished in 50.53 seconds. Status: SUCCESS