mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-j39wx42t because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:49:04,121 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:49:04,954 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:49:05,131 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:49:06,113 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:49:06,183 - cnv_pipe.batch.run_model - INFO - Processing cluster 776 with 198 probes
2026-06-03 21:49:06,704 - cnv_pipe.batch.run_model.cluster776 - INFO - Child process started for cluster 776 with 198 probes
2026-06-03 21:50:06,460 - cnv_pipe.batch.run_model.cluster776 - INFO - Child process finished cluster 776. Wrote cluster_776_samples.csv and cluster_776_params.csv
2026-06-03 21:50:06,462 - cnv_pipe.batch.run_model - INFO - Cluster 776 finished in 60.28 seconds. Status: SUCCESS