File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/51/15e7e920eeb15371f0023561f0a832/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-e9ucep23 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:48:10,110 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:48:10,914 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:48:11,088 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:48:12,052 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:48:12,137 - cnv_pipe.batch.run_model - INFO - Processing cluster 483 with 162 probes
2026-06-03 21:48:12,586 - cnv_pipe.batch.run_model.cluster483 - INFO - Child process started for cluster 483 with 162 probes
2026-06-03 21:49:01,672 - cnv_pipe.batch.run_model.cluster483 - INFO - Child process finished cluster 483. Wrote cluster_483_samples.csv and cluster_483_params.csv
2026-06-03 21:49:01,673 - cnv_pipe.batch.run_model - INFO - Cluster 483 finished in 49.54 seconds. Status: SUCCESS