mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-_pzo2vau because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:48:37,952 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:48:38,756 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:48:38,931 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:48:39,913 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:48:40,089 - cnv_pipe.batch.run_model - INFO - Processing cluster 643 with 199 probes
2026-06-03 21:48:40,462 - cnv_pipe.batch.run_model.cluster643 - INFO - Child process started for cluster 643 with 199 probes
2026-06-03 21:49:39,448 - cnv_pipe.batch.run_model.cluster643 - INFO - Child process finished cluster 643. Wrote cluster_643_samples.csv and cluster_643_params.csv
2026-06-03 21:49:39,450 - cnv_pipe.batch.run_model - INFO - Cluster 643 finished in 59.36 seconds. Status: SUCCESS